CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49214	Soybean	cytosol	93.01	94.67
KRH49213	Soybean	cytosol, endoplasmic reticulum	92.14	93.78
KRH49219	Soybean	cytosol	38.43	88.89
KRH00071	Soybean	nucleus	86.46	88.0
KRH49216	Soybean	cytosol	86.03	87.56
KRH49212	Soybean	cytosol, nucleus	82.53	83.63
KRH00075	Soybean	cytosol	81.66	83.11
KRH49221	Soybean	cytosol, extracellular	81.66	83.11
KRH49224	Soybean	cytosol	79.48	80.89
KRH49222	Soybean	cytosol	69.0	79.4
KRH17938	Soybean	cytosol	51.09	75.48
KRH00072	Soybean	cytosol	70.31	72.52
KRH49218	Soybean	cytosol	69.43	71.95
KRH75749	Soybean	cytosol	63.32	66.21
KRH62422	Soybean	cytosol	62.88	65.45
KRH62423	Soybean	cytosol	62.01	62.83
KRH75750	Soybean	cytosol, nucleus	60.7	61.5
KRH62274	Soybean	extracellular	27.51	61.16
KRH54547	Soybean	cytosol	26.64	53.04
KRH72040	Soybean	cytosol	47.6	48.44
KRH59021	Soybean	cytosol, nucleus	47.16	48.21
KRH52989	Soybean	cytosol	32.31	47.44
KRG90592	Soybean	cytosol	44.98	46.4
KRH59018	Soybean	cytosol	43.23	45.62
KRH59020	Soybean	cytosol	45.41	45.41
KRH42903	Soybean	cytosol	44.98	45.18
KRH42902	Soybean	cytosol	44.1	44.69
KRH19668	Soybean	cytosol, endoplasmic reticulum, mitochondrion	38.43	44.0
KRH59019	Soybean	cytosol	41.92	42.86
KRH19667	Soybean	endoplasmic reticulum, extracellular	41.05	42.15
KRH34584	Soybean	cytosol	39.3	40.36
KRH54548	Soybean	cytosol	40.61	39.57
KRH62275	Soybean	cytosol	18.78	38.05
KRH42905	Soybean	cytosol	45.41	36.49
KRG92200	Soybean	extracellular	35.81	33.2

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	UniProt:A0A0R0JE00	EMBL:ACUP02004341	ncoils:Coil
EnsemblPlantsGene:GLYMA_07G139900	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740	GO:GO:0019748
InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987
EnsemblPlants:KRH49215	ProteinID:KRH49215	ProteinID:KRH49215.1	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF486	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0006ED9200	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:16591514..16592590

Molecular Weight (calculated)

26575.1 Da

IEP (calculated)

5.834

GRAVY (calculated)

-0.187

Length

229 amino acids

Sequence
(BLAST)

001: MAANQEDTQE DVKLLGIVGS PFVCRVKIAL KLKGVQYKFL EQNLRNKSEL LLKSNPVHKK VPVFIHNEKP IAESLVIVEY IDETWKNNPI LPSDPYQRTL
101: ARFWSKFIDD KIVGAVLKSV FTVDEKEREK NVEETYEALQ FLENELKDKK FFGGEEFGLV DIAAVFIAFW IPIFQEIAGL QLFTSEKFPI LYKWSQEFLN
201: HPLVQEVLPP RDPLFTFFKA RYESLSASK

Best Arabidopsis Sequence Match ( AT2G29420.1 )
(BLAST)

001: MAERSNSEEV KLLGMWASPF SRRIEIALTL KGVSYEFLEQ DITNKSSLLL QLNPVHKMIP VLVHNGKPIS ESLVILEYID ETWRDNPILP QDPYERTMAR
101: FWSKFVDEQI YVTAMKVVGK TGKERDAVVE ATRDLLMFLE KELVGKDFLG GKSLGFVDIV ATLVAFWLMR TEEIVGVKVV PVEKFPEIHR WVKNLLGNDV
201: IKKCIPPEDE HLKYIRARME KLNIKSA

Arabidopsis Description

GSTU7Glutathione S-transferase U7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.