CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, cytosol

Predictor Summary:

plastid 2
vacuole 1
cytosol 2
mitochondrion 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19667	Soybean	endoplasmic reticulum, extracellular	87.5	78.48
KRH62274	Soybean	extracellular	29.5	57.28
VIT_07s0005g04890.t01	Wine grape	cytosol	58.5	52.47
KRH49219	Soybean	cytosol	24.0	48.48
Solyc09g063150.2.1	Tomato	cytosol	49.5	45.0
KRH54547	Soybean	cytosol	25.5	44.35
KRH59018	Soybean	cytosol	48.0	44.24
KRH59021	Soybean	cytosol, nucleus	49.5	44.2
KRH59019	Soybean	cytosol	49.0	43.75
KRG90592	Soybean	cytosol	48.5	43.69
KRH52989	Soybean	cytosol	33.5	42.95
KRH62422	Soybean	cytosol	46.5	42.27
KRH59020	Soybean	cytosol	48.0	41.92
KRH49216	Soybean	cytosol	47.0	41.78
KRH00075	Soybean	cytosol	46.5	41.33
KRH42903	Soybean	cytosol	47.0	41.23
KRH75749	Soybean	cytosol	45.0	41.1
KRH49213	Soybean	cytosol, endoplasmic reticulum	46.0	40.89
KRH34584	Soybean	cytosol	45.0	40.36
KRH49221	Soybean	cytosol, extracellular	45.0	40.0
KRH00071	Soybean	nucleus	45.0	40.0
KRH17938	Soybean	cytosol	31.0	40.0
KRH75750	Soybean	cytosol, nucleus	45.0	39.82
KRH49222	Soybean	cytosol	39.5	39.7
KRH49214	Soybean	cytosol	44.5	39.56
KRH49212	Soybean	cytosol, nucleus	44.5	39.38
KRH62423	Soybean	cytosol	44.5	39.38
KRH00072	Soybean	cytosol	43.5	39.19
KRH49224	Soybean	cytosol	44.0	39.11
KRH72040	Soybean	cytosol	44.0	39.11
KRH54548	Soybean	cytosol	45.5	38.72
KRH49218	Soybean	cytosol	42.5	38.46
KRH49215	Soybean	cytosol, nucleus	44.0	38.43
KRH42902	Soybean	cytosol	42.0	37.17
KRH42905	Soybean	cytosol	48.0	33.68
KRH62275	Soybean	cytosol	18.5	32.74
KRG92200	Soybean	extracellular	36.5	29.55

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EMBL:ACUP02008197	EnsemblPlantsGene:GLYMA_13G129100	GO:GO:0003674
GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009407	GO:GO:0009987	GO:GO:0016740	GO:GO:0019748	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	UniProt:I1LYR7	InterPro:IPR004045	InterPro:IPR010987	EnsemblPlants:KRH19668
ProteinID:KRH19668	ProteinID:KRH19668.1	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405
PANTHER:PTHR11260	PANTHER:PTHR11260:SF475	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002958123
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:24215599..24216303

Molecular Weight (calculated)

23266.4 Da

IEP (calculated)

6.287

GRAVY (calculated)

-0.051

Length

200 amino acids

Sequence
(BLAST)

001: LLGVWPSPYV YRIIWALGLK GVKYEYIQGE FHKSDFTDLL LKYNPVYKKV PVLVLDGKPI AESMVILEYI EEIWPQPPLL PKDPYKRAMA RFWVSFAEEK
101: KATKEVREVL KVLEETIGDK KYFGGEEIGL LDINLGWIAL SFGVIEDIVG VKVLVVDDFP CLFTWIQNFR EHQAIKTNLP NHQDLFVYYK QKRETIIPSS

Best Arabidopsis Sequence Match ( AT2G29420.1 )
(BLAST)

001: MAERSNSEEV KLLGMWASPF SRRIEIALTL KGVSYEFLEQ DITNKSSLLL QLNPVHKMIP VLVHNGKPIS ESLVILEYID ETWRDNPILP QDPYERTMAR
101: FWSKFVDEQI YVTAMKVVGK TGKERDAVVE ATRDLLMFLE KELVGKDFLG GKSLGFVDIV ATLVAFWLMR TEEIVGVKVV PVEKFPEIHR WVKNLLGNDV
201: IKKCIPPEDE HLKYIRARME KLNIKSA

Arabidopsis Description

GSTU7Glutathione S-transferase U7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.