Factsheet for VIT_07s0005g04890.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0005g04880.t01	Wine grape	cytosol	67.71	68.02
VIT_07s0005g04870.t01	Wine grape	cytosol	65.92	64.76
VIT_06s0004g05680.t01	Wine grape	cytosol	31.39	64.22
VIT_05s0051g00130.t01	Wine grape	endoplasmic reticulum	56.95	63.5
VIT_05s0051g00110.t01	Wine grape	cytosol	61.88	61.61
VIT_17s0000g06120.t01	Wine grape	cytosol	30.04	60.91
Solyc09g063150.2.1	Tomato	cytosol	58.3	59.09
VIT_06s0004g05710.t01	Wine grape	cytosol	20.63	58.97
KRH19668	Soybean	cytosol, endoplasmic reticulum, mitochondrion	52.47	58.5
VIT_05s0051g00180.t01	Wine grape	endoplasmic reticulum	56.95	57.99
KRH19667	Soybean	endoplasmic reticulum, extracellular	56.95	56.95
VIT_15s0024g01630.t01	Wine grape	cytosol	50.22	52.83
VIT_15s0024g01540.t01	Wine grape	cytosol	53.36	52.19
VIT_17s0000g02950.t01	Wine grape	cytosol	52.02	51.56
VIT_17s0000g02930.t01	Wine grape	cytosol	52.02	51.56
VIT_15s0024g01650.t01	Wine grape	cytosol	51.57	51.11
VIT_00s0153g00050.t01	Wine grape	endoplasmic reticulum	51.12	50.67
VIT_08s0040g00920.t01	Wine grape	cytosol	51.57	50.66
VIT_18s0001g07010.t01	Wine grape	cytosol	39.01	50.0
VIT_16s0039g00970.t01	Wine grape	cytosol	52.02	49.15
VIT_16s0039g01070.t01	Wine grape	cytosol	52.02	49.15
VIT_00s0153g00070.t01	Wine grape	cytosol	50.67	48.92
VIT_08s0007g01420.t01	Wine grape	cytosol	47.53	48.62
VIT_08s0007g01400.t01	Wine grape	cytosol	47.98	48.42
VIT_17s0000g02920.t01	Wine grape	extracellular	47.98	48.42
VIT_08s0007g01410.t01	Wine grape	cytosol	47.53	47.96
VIT_16s0039g00990.t01	Wine grape	cytosol	50.67	47.88
VIT_17s0000g06130.t01	Wine grape	cytosol	47.98	47.14
VIT_05s0049g01070.t01	Wine grape	cytosol, endoplasmic reticulum	47.98	47.14
VIT_05s0049g01090.t01	Wine grape	endoplasmic reticulum	47.98	47.14
VIT_05s0049g01100.t01	Wine grape	endoplasmic reticulum	47.98	47.14
VIT_18s0072g00320.t01	Wine grape	cytosol	58.74	46.79
VIT_05s0049g01120.t01	Wine grape	endoplasmic reticulum	47.53	46.7
VIT_06s0004g05700.t01	Wine grape	cytosol	45.74	46.36
VIT_17s0000g06110.t01	Wine grape	cytosol	47.09	44.49
VIT_05s0049g01080.t01	Wine grape	cytosol, endoplasmic reticulum	47.53	44.35
VIT_17s0000g02940.t01	Wine grape	cytosol	34.98	44.07
VIT_17s0000g06140.t01	Wine grape	cytosol	44.84	43.29
VIT_14s0060g02170.t01	Wine grape	cytosol	44.84	43.29
VIT_01s0026g02400.t01	Wine grape	cytosol	43.5	42.73
VIT_01s0026g02390.t01	Wine grape	cytosol	43.5	42.54
VIT_01s0026g02370.t01	Wine grape	cytosol	43.05	42.11
VIT_15s0107g00150.t01	Wine grape	endoplasmic reticulum, plastid	44.39	36.67
VIT_06s0004g05670.t01	Wine grape	cytosol	49.33	31.25
VIT_17s0000g06150.t01	Wine grape	cytosol, plastid	23.32	30.77

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:100251558	wikigene:100251558	MapMan:18.8.1.4	Gene3D:3.40.30.10	ProteinID:CCB60208
ProteinID:CCB60208.1	ncoils:Coil	UniProt:F6HZU2	EMBL:FN596502	GO:GO:0003674	GO:GO:0003824
GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407
GO:GO:0009987	GO:GO:0016740	GO:GO:0019748	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	EntrezGene:LOC100251558	wikigene:LOC100251558	PFAM:PF00043
PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF475	SUPFAM:SSF47616
SUPFAM:SSF52833	TIGR:TC52643	InterPro:Thioredoxin-like_sf	UniParc:UPI00015CA3E2	ArrayExpress:VIT_07s0005g04890	EnsemblPlantsGene:VIT_07s0005g04890
EnsemblPlants:VIT_07s0005g04890.t01	unigene:Vvi.896	RefSeq:XP_002266744	RefSeq:XP_002266744.1	RefSeq:XP_002266793	RefSeq:XP_002266793.2
RefSeq:XP_003632433	RefSeq:XP_003632433.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7:-:8141027..8142187

Molecular Weight (calculated)

25803.3 Da

IEP (calculated)

4.698

GRAVY (calculated)

-0.296

Length

223 amino acids

Sequence
(BLAST)

001: MEEEVKLLGA WPSPYSYRVL WALSLKDIKY EYVEEDLSNK SDLLLQYNPV YKKIPVLVHG GKPISESLVI LEYMEETWPQ NPLLPQDPYD KAMARFWAKF
101: GEDKGPIFMA IFVTVGEEQE KAAKEAKEQL TILEEQALGE KKFFGGDKIG LTDIVLGWMA GWLDVIEEVS GLKLLEAEIF PRLHAWVQRF KEVPGIKEQL
201: PDRDEMLVYY KKKREMFIGS VKP

Best Arabidopsis Sequence Match ( AT1G78320.1 )
(BLAST)

001: MEEEIILLDY WASMYGMRTR IALEEKKVKY EYREEDLSNK SPLLLQMNPI HKKIPVLIHE GKPICESIIQ VQYIDELWPD TNPILPSDPY QRAQARFWAD
101: YIDKKTYVPC KALWSESGEK QEAAKIEFIE VLKTLDSELG DKYYFGGNEF GLVDIAFIGF YSWFRTYEEV ANLSIVLEFP KLMAWAQRCL KRESVAKALP
201: DSDKVLKSVS DHRKIILGID

Arabidopsis Description

GSTU23Glutathione S-transferase U23 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9F1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.