Factsheet for VIT_01s0026g02400.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0026g02370.t01	Wine grape	cytosol	89.43	89.04
VIT_01s0026g02390.t01	Wine grape	cytosol	89.43	89.04
VIT_17s0000g06120.t01	Wine grape	cytosol	32.6	67.27
VIT_06s0004g05680.t01	Wine grape	cytosol	31.72	66.06
VIT_06s0004g05710.t01	Wine grape	cytosol	22.47	65.38
VIT_17s0000g06130.t01	Wine grape	cytosol	53.74	53.74
VIT_17s0000g06140.t01	Wine grape	cytosol	52.86	51.95
VIT_17s0000g06110.t01	Wine grape	cytosol	53.3	51.27
VIT_06s0004g05700.t01	Wine grape	cytosol	45.81	47.27
VIT_05s0051g00130.t01	Wine grape	endoplasmic reticulum	40.97	46.5
GSMUA_Achr2P03090_001	Banana	extracellular	46.7	45.89
VIT_17s0000g02920.t01	Wine grape	extracellular	44.49	45.7
VIT_08s0007g01420.t01	Wine grape	cytosol	43.17	44.95
VIT_17s0000g02930.t01	Wine grape	cytosol	44.05	44.44
VIT_05s0051g00180.t01	Wine grape	endoplasmic reticulum	42.73	44.29
VIT_08s0040g00920.t01	Wine grape	cytosol	44.05	44.05
VIT_17s0000g02950.t01	Wine grape	cytosol	43.61	44.0
VIT_00s0153g00050.t01	Wine grape	endoplasmic reticulum	43.61	44.0
VIT_15s0024g01630.t01	Wine grape	cytosol	40.97	43.87
VIT_05s0051g00110.t01	Wine grape	cytosol	43.17	43.75
VIT_07s0005g04890.t01	Wine grape	cytosol	42.73	43.5
VIT_08s0007g01410.t01	Wine grape	cytosol	42.29	43.44
VIT_15s0024g01540.t01	Wine grape	cytosol	43.61	43.42
GSMUA_Achr5P11960_001	Banana	cytosol	39.65	43.27
VIT_16s0039g00990.t01	Wine grape	cytosol	44.93	43.22
VIT_16s0039g00970.t01	Wine grape	cytosol	44.93	43.22
VIT_08s0007g01400.t01	Wine grape	cytosol	41.41	42.53
VIT_16s0039g01070.t01	Wine grape	cytosol	43.61	41.95
VIT_17s0000g02940.t01	Wine grape	cytosol	32.6	41.81
VIT_18s0001g07010.t01	Wine grape	cytosol	31.72	41.38
VIT_14s0060g02170.t01	Wine grape	cytosol	41.85	41.13
VIT_15s0024g01650.t01	Wine grape	cytosol	40.53	40.89
VIT_07s0005g04880.t01	Wine grape	cytosol	39.65	40.54
VIT_17s0000g06150.t01	Wine grape	cytosol, plastid	29.96	40.24
VIT_07s0005g04870.t01	Wine grape	cytosol	39.65	39.65
GSMUA_Achr1P00010_001	Banana	cytosol	40.09	39.39
VIT_05s0049g01070.t01	Wine grape	cytosol, endoplasmic reticulum	39.21	39.21
VIT_00s0153g00070.t01	Wine grape	cytosol	39.65	38.96
VIT_05s0049g01100.t01	Wine grape	endoplasmic reticulum	38.77	38.77
VIT_05s0049g01120.t01	Wine grape	endoplasmic reticulum	38.33	38.33
VIT_05s0049g01090.t01	Wine grape	endoplasmic reticulum	38.33	38.33
VIT_05s0049g01080.t01	Wine grape	cytosol, endoplasmic reticulum	38.77	36.82
VIT_18s0072g00320.t01	Wine grape	cytosol	44.49	36.07
Zm00001d038192_P001	Maize	cytosol, mitochondrion	42.29	35.96
EES19527	Sorghum	cytosol	40.97	35.5
TraesCS1B01G269100.1	Wheat	cytosol	40.97	33.94
TraesCS1A01G258500.1	Wheat	cytosol	40.97	33.94
TraesCS1D01G257800.1	Wheat	cytosol	40.97	33.7
Os05t0412800-01	Rice	cytosol	40.53	33.58
VIT_15s0107g00150.t01	Wine grape	endoplasmic reticulum, plastid	37.89	31.85
VIT_06s0004g05670.t01	Wine grape	cytosol	42.73	27.56
HORVU1Hr1G064890.1	Barley	cytosol	40.97	26.88

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:100263691	wikigene:100263691	MapMan:18.8.1.4	Gene3D:3.40.30.10	EMBL:AM478818
ProteinID:CAN75202	ProteinID:CAN75202.1	ProteinID:CCB56548	ProteinID:CCB56548.1	UniProt:F6HPC0	EMBL:FN596002
GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740	GO:GO:0019748	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	EntrezGene:LOC100263691	wikigene:LOC100263691
PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF490	SUPFAM:SSF47616
SUPFAM:SSF52833	TIGR:TC66078	InterPro:Thioredoxin-like_sf	UniParc:UPI00015CBCCD	ArrayExpress:VIT_01s0026g02400	EnsemblPlantsGene:VIT_01s0026g02400
EnsemblPlants:VIT_01s0026g02400.t01	unigene:Vvi.17286	RefSeq:XP_002275338	RefSeq:XP_002275338.2	:	:

Description

No Description!

Coordinates

chr1:+:11974881..11975881

Molecular Weight (calculated)

25868.3 Da

IEP (calculated)

6.628

GRAVY (calculated)

-0.239

Length

227 amino acids

Sequence
(BLAST)

001: MEKQSEVKLF GTWASVYCTR IELALKLKGI PYEYVEEDLP NKSDLLIHHN PVHKKVPVLV HNGKAIAESL VILEYIDEHW NHTPKLLPAD PYERAKVRFW
101: ANFYDQKFGP SIYNIMTSKG KEQEKAIEDS LEVLKVFEEG IERDFPAKSP FLNGGTLGFL DIVVGSSSCN FKAFNEVFAV VFDPEKNPAF CSWVTAMKEC
201: PLMKETLPPH DRLVAKISKL FLQPPKA

Best Arabidopsis Sequence Match ( AT1G74590.1 )
(BLAST)

001: MEEKKSKVIL HGTWISTYSK RVEIALKLKG VLYEYLEEDL QNKSESLIQL NPVHKKIPVL VHDGKPVAES LVILEYIDET WTNSPRFFPE DPYERAQVRF
101: WVSYINQQVF EVMGQVMSQE GEAQAKSVEE ARKRFKVLDE GLKKHFPNKN IRRNDDVGLL EITIIATLGG YKAHREAIGV DIIGPVNTPT LYNWIERLQD
201: LSVIKEVEVP HDTLVTFIQK YRQKCLQQAA NA

Arabidopsis Description

GSTU10Glutathione S-transferase U10 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA57]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.