Factsheet for VIT_01s0026g02370.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0026g02390.t01	Wine grape	cytosol	98.25	98.25
VIT_01s0026g02400.t01	Wine grape	cytosol	89.04	89.43
VIT_17s0000g06120.t01	Wine grape	cytosol	31.58	65.45
VIT_06s0004g05680.t01	Wine grape	cytosol	30.7	64.22
VIT_06s0004g05710.t01	Wine grape	cytosol	21.93	64.1
VIT_17s0000g06130.t01	Wine grape	cytosol	50.88	51.1
VIT_17s0000g06140.t01	Wine grape	cytosol	51.32	50.65
VIT_17s0000g06110.t01	Wine grape	cytosol	50.44	48.73
VIT_15s0024g01630.t01	Wine grape	cytosol	43.86	47.17
VIT_05s0051g00130.t01	Wine grape	endoplasmic reticulum	40.79	46.5
VIT_06s0004g05700.t01	Wine grape	cytosol	44.74	46.36
VIT_00s0153g00050.t01	Wine grape	endoplasmic reticulum	45.61	46.22
VIT_08s0007g01420.t01	Wine grape	cytosol	43.42	45.41
VIT_17s0000g02920.t01	Wine grape	extracellular	43.86	45.25
GSMUA_Achr5P11960_001	Banana	cytosol	41.23	45.19
VIT_15s0024g01540.t01	Wine grape	cytosol	44.74	44.74
VIT_08s0040g00920.t01	Wine grape	cytosol	44.3	44.49
VIT_17s0000g02930.t01	Wine grape	cytosol	43.86	44.44
VIT_05s0051g00180.t01	Wine grape	endoplasmic reticulum	42.54	44.29
VIT_17s0000g02950.t01	Wine grape	cytosol	43.42	44.0
VIT_08s0007g01410.t01	Wine grape	cytosol	42.54	43.89
GSMUA_Achr2P03090_001	Banana	extracellular	44.3	43.72
VIT_16s0039g00990.t01	Wine grape	cytosol	45.18	43.64
VIT_16s0039g00970.t01	Wine grape	cytosol	45.18	43.64
VIT_15s0024g01650.t01	Wine grape	cytosol	42.98	43.56
VIT_08s0007g01400.t01	Wine grape	cytosol	42.11	43.44
VIT_07s0005g04890.t01	Wine grape	cytosol	42.11	43.05
VIT_05s0051g00110.t01	Wine grape	cytosol	42.11	42.86
VIT_00s0153g00070.t01	Wine grape	cytosol	42.54	41.99
VIT_07s0005g04880.t01	Wine grape	cytosol	40.79	41.89
VIT_17s0000g02940.t01	Wine grape	cytosol	32.46	41.81
VIT_16s0039g01070.t01	Wine grape	cytosol	42.98	41.53
VIT_18s0001g07010.t01	Wine grape	cytosol	31.14	40.8
VIT_07s0005g04870.t01	Wine grape	cytosol	39.91	40.09
VIT_14s0060g02170.t01	Wine grape	cytosol	40.35	39.83
GSMUA_Achr1P00010_001	Banana	cytosol	39.91	39.39
VIT_17s0000g06150.t01	Wine grape	cytosol, plastid	28.95	39.05
VIT_05s0049g01070.t01	Wine grape	cytosol, endoplasmic reticulum	38.6	38.77
VIT_05s0049g01100.t01	Wine grape	endoplasmic reticulum	38.16	38.33
VIT_05s0049g01120.t01	Wine grape	endoplasmic reticulum	37.72	37.89
VIT_05s0049g01090.t01	Wine grape	endoplasmic reticulum	37.72	37.89
VIT_05s0049g01080.t01	Wine grape	cytosol, endoplasmic reticulum	38.16	36.4
VIT_18s0072g00320.t01	Wine grape	cytosol	44.3	36.07
Zm00001d038192_P001	Maize	cytosol, mitochondrion	41.67	35.58
EES19527	Sorghum	cytosol	40.35	35.11
VIT_15s0107g00150.t01	Wine grape	endoplasmic reticulum, plastid	40.79	34.44
TraesCS1D01G257800.1	Wheat	cytosol	40.79	33.7
TraesCS1B01G269100.1	Wheat	cytosol	40.35	33.58
TraesCS1A01G258500.1	Wheat	cytosol	40.35	33.58
Os05t0412800-01	Rice	cytosol	40.35	33.58
VIT_06s0004g05670.t01	Wine grape	cytosol	42.11	27.27
HORVU1Hr1G064890.1	Barley	cytosol	40.35	26.59

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:100260235	wikigene:100260235	MapMan:18.8.1.4	Gene3D:3.40.30.10	ProteinID:CCB56550
ProteinID:CCB56550.1	UniProt:F6HPC2	EMBL:FN596002	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987
GO:GO:0016740	GO:GO:0019748	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	EntrezGene:LOC100260235	wikigene:LOC100260235	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405
PANTHER:PTHR11260	PANTHER:PTHR11260:SF490	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0001982AA0
ArrayExpress:VIT_01s0026g02370	EnsemblPlantsGene:VIT_01s0026g02370	EnsemblPlants:VIT_01s0026g02370.t01	unigene:Vvi.25640	RefSeq:XP_002270113	RefSeq:XP_002270113.1

Description

No Description!

Coordinates

chr1:+:11948164..11949128

Molecular Weight (calculated)

26117.7 Da

IEP (calculated)

8.303

GRAVY (calculated)

-0.395

Length

228 amino acids

Sequence
(BLAST)

001: MEKQSEVKLF GTWSSGYCTR IKLALKLKGI PYEYVEEDLS NKSDLLIHHN PVHKKVPVLV HNGKAIAESL VILEYIDEHW NHTPKLLPED PYERAKVRFW
101: ANFYDQKFKP SIYNIMTSKG KEQEKAIEDS REVLMVFEEG IERDFPAKSP FLNGGPLGFL DIVVGSSACN YKAMNEVVGV VVDPKKNPAF CYWMAAMKDC
201: PLMKETLPPH DRLVAKMRSK FSLQPPKT

Best Arabidopsis Sequence Match ( AT1G74590.1 )
(BLAST)

001: MEEKKSKVIL HGTWISTYSK RVEIALKLKG VLYEYLEEDL QNKSESLIQL NPVHKKIPVL VHDGKPVAES LVILEYIDET WTNSPRFFPE DPYERAQVRF
101: WVSYINQQVF EVMGQVMSQE GEAQAKSVEE ARKRFKVLDE GLKKHFPNKN IRRNDDVGLL EITIIATLGG YKAHREAIGV DIIGPVNTPT LYNWIERLQD
201: LSVIKEVEVP HDTLVTFIQK YRQKCLQQAA NA

Arabidopsis Description

GSTU10Glutathione S-transferase U10 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA57]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.