Factsheet for VIT_15s0024g01540.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0024g01630.t01	Wine grape	cytosol	77.63	83.49
VIT_00s0153g00050.t01	Wine grape	endoplasmic reticulum	80.26	81.33
VIT_15s0024g01650.t01	Wine grape	cytosol	80.26	81.33
VIT_00s0153g00070.t01	Wine grape	cytosol	82.02	80.95
VIT_06s0004g05680.t01	Wine grape	cytosol	34.65	72.48
VIT_06s0004g05710.t01	Wine grape	cytosol	23.68	69.23
Solyc01g081270.2.1	Tomato	cytosol, endoplasmic reticulum	64.91	66.37
PGSC0003DMT400004540	Potato	cytosol	63.6	64.44
VIT_17s0000g06120.t01	Wine grape	cytosol	29.39	60.91
VIT_15s0107g00150.t01	Wine grape	endoplasmic reticulum, plastid	69.74	58.89
VIT_05s0051g00130.t01	Wine grape	endoplasmic reticulum	47.81	54.5
VIT_07s0005g04890.t01	Wine grape	cytosol	52.19	53.36
VIT_17s0000g02950.t01	Wine grape	cytosol	52.63	53.33
VIT_17s0000g02930.t01	Wine grape	cytosol	52.63	53.33
VIT_17s0000g02920.t01	Wine grape	extracellular	51.32	52.94
Os12t0123200-01	Rice	cytosol	46.93	52.71
VIT_08s0040g00920.t01	Wine grape	cytosol	51.75	51.98
VIT_17s0000g02940.t01	Wine grape	cytosol	39.91	51.41
VIT_18s0001g07010.t01	Wine grape	cytosol	39.04	51.15
VIT_05s0051g00110.t01	Wine grape	cytosol	50.0	50.89
VIT_08s0007g01400.t01	Wine grape	cytosol	49.12	50.68
VIT_05s0051g00180.t01	Wine grape	endoplasmic reticulum	48.25	50.23
VIT_08s0007g01410.t01	Wine grape	cytosol	48.68	50.23
VIT_06s0004g05700.t01	Wine grape	cytosol	48.25	50.0
VIT_08s0007g01420.t01	Wine grape	cytosol	47.81	50.0
VIT_05s0049g01120.t01	Wine grape	endoplasmic reticulum	49.12	49.34
VIT_05s0049g01090.t01	Wine grape	endoplasmic reticulum	49.12	49.34
VIT_07s0005g04880.t01	Wine grape	cytosol	47.81	49.1
VIT_07s0005g04870.t01	Wine grape	cytosol	48.68	48.9
VIT_05s0049g01100.t01	Wine grape	endoplasmic reticulum	48.25	48.46
VIT_05s0049g01070.t01	Wine grape	cytosol, endoplasmic reticulum	47.81	48.02
VIT_16s0039g00970.t01	Wine grape	cytosol	49.56	47.88
VIT_17s0000g06130.t01	Wine grape	cytosol	47.37	47.58
VIT_16s0039g01070.t01	Wine grape	cytosol	49.12	47.46
VIT_16s0039g00990.t01	Wine grape	cytosol	48.68	47.03
TraesCS5A01G143500.1	Wheat	cytosol	47.81	46.78
VIT_17s0000g06110.t01	Wine grape	cytosol	47.37	45.76
VIT_05s0049g01080.t01	Wine grape	cytosol, endoplasmic reticulum	47.81	45.61
Zm00001d052384_P001	Maize	cytosol	29.39	45.27
VIT_14s0060g02170.t01	Wine grape	cytosol	45.61	45.02
VIT_01s0026g02390.t01	Wine grape	cytosol	44.74	44.74
VIT_01s0026g02370.t01	Wine grape	cytosol	44.74	44.74
VIT_17s0000g06140.t01	Wine grape	cytosol	44.74	44.16
VIT_01s0026g02400.t01	Wine grape	cytosol	43.42	43.61
VIT_18s0072g00320.t01	Wine grape	cytosol	48.68	39.64
TraesCS5B01G142500.1	Wheat	cytosol	45.18	34.33
TraesCS5D01G148500.2	Wheat	cytosol	31.14	33.97
VIT_06s0004g05670.t01	Wine grape	cytosol	51.32	33.24
HORVU5Hr1G045850.3	Barley	cytosol	46.93	31.75
VIT_17s0000g06150.t01	Wine grape	cytosol, plastid	21.05	28.4

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:100254124	wikigene:100254124	MapMan:18.8.1.4	Gene3D:3.40.30.10	EMBL:AM446860
ProteinID:CAN78656	ProteinID:CAN78656.1	ProteinID:CCB62140	ProteinID:CCB62140.1	UniProt:F6I5C2	EMBL:FN596748
GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740	GO:GO:0019748	InterPro:GST_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	EntrezGene:LOC100254124
wikigene:LOC100254124	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260
PANTHER:PTHR11260:SF485	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00015C9E05	ArrayExpress:VIT_15s0024g01540
EnsemblPlantsGene:VIT_15s0024g01540	EnsemblPlants:VIT_15s0024g01540.t01	unigene:Vvi.19504	RefSeq:XP_002264054	RefSeq:XP_002264054.1	SEG:seg

Description

No Description!

Coordinates

chr15:+:3085327..3086351

Molecular Weight (calculated)

25765.3 Da

IEP (calculated)

5.210

GRAVY (calculated)

-0.057

Length

228 amino acids

Sequence
(BLAST)

001: MAEEVKLFRT WSSPFALRAV WALKIKGIDY ETIFEDLSNK SPSLLQYNPV YKKVPVLVHK GKPIAESLVI LEYIDETWKQ APLLPEDPHE RATARFWAKF
101: GEDKVLTSIW SVFIKQGKEQ EEAMVPALEN LKFLEEELKG KKFFGGETIG FVDLALGWLG NLISILEEIV GLKVVDGEKF PLLSAWMQDF ADAPIIKDNW
201: PPRDRMIVKF QALRDATIAA AAAAATSK

Best Arabidopsis Sequence Match ( AT2G29420.1 )
(BLAST)

001: MAERSNSEEV KLLGMWASPF SRRIEIALTL KGVSYEFLEQ DITNKSSLLL QLNPVHKMIP VLVHNGKPIS ESLVILEYID ETWRDNPILP QDPYERTMAR
101: FWSKFVDEQI YVTAMKVVGK TGKERDAVVE ATRDLLMFLE KELVGKDFLG GKSLGFVDIV ATLVAFWLMR TEEIVGVKVV PVEKFPEIHR WVKNLLGNDV
201: IKKCIPPEDE HLKYIRARME KLNIKSA

Arabidopsis Description

GSTU7Glutathione S-transferase U7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.