Factsheet for VIT_01s0026g02390.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0026g02370.t01	Wine grape	cytosol	98.25	98.25
VIT_01s0026g02400.t01	Wine grape	cytosol	89.04	89.43
VIT_17s0000g06120.t01	Wine grape	cytosol	31.14	64.55
VIT_06s0004g05710.t01	Wine grape	cytosol	21.93	64.1
VIT_06s0004g05680.t01	Wine grape	cytosol	30.26	63.3
VIT_17s0000g06130.t01	Wine grape	cytosol	50.88	51.1
VIT_17s0000g06140.t01	Wine grape	cytosol	50.88	50.22
VIT_17s0000g06110.t01	Wine grape	cytosol	50.44	48.73
VIT_15s0024g01630.t01	Wine grape	cytosol	44.3	47.64
VIT_06s0004g05700.t01	Wine grape	cytosol	45.61	47.27
VIT_05s0051g00130.t01	Wine grape	endoplasmic reticulum	40.79	46.5
VIT_00s0153g00050.t01	Wine grape	endoplasmic reticulum	45.18	45.78
VIT_08s0007g01420.t01	Wine grape	cytosol	43.42	45.41
VIT_15s0024g01540.t01	Wine grape	cytosol	44.74	44.74
VIT_17s0000g02920.t01	Wine grape	extracellular	42.98	44.34
VIT_05s0051g00180.t01	Wine grape	endoplasmic reticulum	42.54	44.29
GSMUA_Achr5P11960_001	Banana	cytosol	40.35	44.23
VIT_08s0040g00920.t01	Wine grape	cytosol	43.86	44.05
VIT_08s0007g01410.t01	Wine grape	cytosol	42.54	43.89
VIT_17s0000g02930.t01	Wine grape	cytosol	42.98	43.56
VIT_07s0005g04890.t01	Wine grape	cytosol	42.54	43.5
VIT_15s0024g01650.t01	Wine grape	cytosol	42.54	43.11
VIT_17s0000g02950.t01	Wine grape	cytosol	42.54	43.11
VIT_08s0007g01400.t01	Wine grape	cytosol	41.67	42.99
VIT_05s0051g00110.t01	Wine grape	cytosol	42.11	42.86
GSMUA_Achr2P03090_001	Banana	extracellular	43.42	42.86
VIT_16s0039g00970.t01	Wine grape	cytosol	44.3	42.8
VIT_16s0039g00990.t01	Wine grape	cytosol	44.3	42.8
VIT_00s0153g00070.t01	Wine grape	cytosol	42.11	41.56
VIT_07s0005g04880.t01	Wine grape	cytosol	40.35	41.44
VIT_18s0001g07010.t01	Wine grape	cytosol	31.58	41.38
VIT_16s0039g01070.t01	Wine grape	cytosol	42.11	40.68
VIT_17s0000g02940.t01	Wine grape	cytosol	31.58	40.68
VIT_07s0005g04870.t01	Wine grape	cytosol	39.47	39.65
VIT_14s0060g02170.t01	Wine grape	cytosol	39.91	39.39
GSMUA_Achr1P00010_001	Banana	cytosol	39.04	38.53
VIT_17s0000g06150.t01	Wine grape	cytosol, plastid	28.51	38.46
VIT_05s0049g01070.t01	Wine grape	cytosol, endoplasmic reticulum	38.16	38.33
VIT_05s0049g01100.t01	Wine grape	endoplasmic reticulum	37.72	37.89
VIT_05s0049g01120.t01	Wine grape	endoplasmic reticulum	37.28	37.44
VIT_05s0049g01090.t01	Wine grape	endoplasmic reticulum	37.28	37.44
VIT_18s0072g00320.t01	Wine grape	cytosol	44.3	36.07
VIT_05s0049g01080.t01	Wine grape	cytosol, endoplasmic reticulum	37.72	35.98
Zm00001d038192_P001	Maize	cytosol, mitochondrion	41.23	35.21
EES19527	Sorghum	cytosol	39.91	34.73
VIT_15s0107g00150.t01	Wine grape	endoplasmic reticulum, plastid	40.35	34.07
TraesCS1D01G257800.1	Wheat	cytosol	40.35	33.33
TraesCS1B01G269100.1	Wheat	cytosol	39.91	33.21
TraesCS1A01G258500.1	Wheat	cytosol	39.91	33.21
Os05t0412800-01	Rice	cytosol	39.91	33.21
VIT_06s0004g05670.t01	Wine grape	cytosol	42.98	27.84
HORVU1Hr1G064890.1	Barley	cytosol	39.91	26.3

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:100265455	wikigene:100265455	MapMan:18.8.1.4	Gene3D:3.40.30.10	EMBL:AM468265
ProteinID:CAN70457	ProteinID:CAN70457.1	ProteinID:CCB56549	ProteinID:CCB56549.1	UniProt:F6HPC1	EMBL:FN596002
GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740	GO:GO:0019748	InterPro:Glutathione-S-Trfase_C-like
InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	EntrezGene:LOC100265455	wikigene:LOC100265455
PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF490	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI00015CBCCE	ArrayExpress:VIT_01s0026g02390	EnsemblPlantsGene:VIT_01s0026g02390	EnsemblPlants:VIT_01s0026g02390.t01
RefSeq:XP_002270090	RefSeq:XP_002270090.1	:	:	:	:

Description

No Description!

Coordinates

chr1:+:11957503..11958436

Molecular Weight (calculated)

26159.7 Da

IEP (calculated)

8.814

GRAVY (calculated)

-0.468

Length

228 amino acids

Sequence
(BLAST)

001: MEKQSEVKLF GTWSSGYCTR IKLALKLKGI PYEYVEEDLS NKSDLLIHHN PVHKKVPVLV HNGKAIAESL VILEYIDEHW NHTPKLLPED PYEKAKVRFW
101: ANFYDQKFKP SIYNIMTSKG KEQEKAIEDS REVLKVFEEG RERDFPAKSP FLNGGPLGFL DIVVGSSACN YKAMNEVVGV VVDPKKNPAF CYWMTAMKDC
201: PLMKETLPPH DRLVAKMRSK FSLQPPKT

Best Arabidopsis Sequence Match ( AT1G74590.1 )
(BLAST)

001: MEEKKSKVIL HGTWISTYSK RVEIALKLKG VLYEYLEEDL QNKSESLIQL NPVHKKIPVL VHDGKPVAES LVILEYIDET WTNSPRFFPE DPYERAQVRF
101: WVSYINQQVF EVMGQVMSQE GEAQAKSVEE ARKRFKVLDE GLKKHFPNKN IRRNDDVGLL EITIIATLGG YKAHREAIGV DIIGPVNTPT LYNWIERLQD
201: LSVIKEVEVP HDTLVTFIQK YRQKCLQQAA NA

Arabidopsis Description

GSTU10Glutathione S-transferase U10 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA57]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.