CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus, cytosol

Predictor Summary:

cytosol 5
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00071	Soybean	nucleus	86.73	87.11
KRH49219	Soybean	cytosol	38.05	86.87
KRH49213	Soybean	cytosol, endoplasmic reticulum	84.51	84.89
KRH49214	Soybean	cytosol	84.07	84.44
KRH49221	Soybean	cytosol, extracellular	82.74	83.11
KRH49215	Soybean	cytosol, nucleus	83.63	82.53
KRH49216	Soybean	cytosol	81.42	81.78
KRH49224	Soybean	cytosol	80.97	81.33
KRH00075	Soybean	cytosol	80.97	81.33
KRH49222	Soybean	cytosol	65.93	74.87
KRH17938	Soybean	cytosol	50.44	73.55
KRH00072	Soybean	cytosol	72.12	73.42
KRH49218	Soybean	cytosol	69.91	71.49
KRH62422	Soybean	cytosol	66.37	68.18
KRH75749	Soybean	cytosol	65.49	67.58
KRH62274	Soybean	extracellular	29.65	65.05
KRH62423	Soybean	cytosol	64.6	64.6
KRH75750	Soybean	cytosol, nucleus	63.72	63.72
KRH54547	Soybean	cytosol	28.32	55.65
KRH72040	Soybean	cytosol	50.0	50.22
KRH52989	Soybean	cytosol	34.51	50.0
KRH59021	Soybean	cytosol, nucleus	48.67	49.11
KRH59020	Soybean	cytosol	48.23	47.6
KRH59018	Soybean	cytosol	45.58	47.47
KRH42903	Soybean	cytosol	47.79	47.37
KRH59019	Soybean	cytosol	45.58	45.98
KRG90592	Soybean	cytosol	45.13	45.95
KRH42902	Soybean	cytosol	44.69	44.69
KRH19668	Soybean	cytosol, endoplasmic reticulum, mitochondrion	39.38	44.5
KRH34584	Soybean	cytosol	42.92	43.5
KRH19667	Soybean	endoplasmic reticulum, extracellular	42.04	42.6
KRH54548	Soybean	cytosol	42.04	40.43
KRH62275	Soybean	cytosol	19.03	38.05
KRH42905	Soybean	cytosol	46.9	37.19
KRG92200	Soybean	extracellular	36.73	33.6

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:100806714	MapMan:18.8.1.4	Gene3D:3.40.30.10	EMBL:ACUP02004340	ncoils:Coil
EnsemblPlantsGene:GLYMA_07G139600	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740	GO:GO:0019748
InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	UniProt:I1KK55	InterPro:IPR004045
InterPro:IPR010987	EMBL:KM818440	EnsemblPlants:KRH49212	ProteinID:KRH49212	ProteinID:KRH49212.1	PFAM:PF00043
PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF486	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002338D91	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr7:+:16572244..16573732

Molecular Weight (calculated)

26074.5 Da

IEP (calculated)

5.220

GRAVY (calculated)

-0.114

Length

226 amino acids

Sequence
(BLAST)

001: MATNQEEVSL LGVVGSPFVC RVQIALKLKG IQYKFFEENL VNKSELLLKY NPVHKKVPVF VHNEKPIAES LVIVEYIDET WKNNPILPSD PYQRALARFW
101: SKFIDDKIGG AVWKSVFTVD EKEREKNVEE SLEALQFLES EIKGKKFFGG EEFGMVDIAA IFIAFWVPMV QEIAGLELFT SEKFPKLYNW SQEFMSHPVV
201: KEVLPPRDPL FAFFKARYES LLADSK

Best Arabidopsis Sequence Match ( AT2G29420.1 )
(BLAST)

001: MAERSNSEEV KLLGMWASPF SRRIEIALTL KGVSYEFLEQ DITNKSSLLL QLNPVHKMIP VLVHNGKPIS ESLVILEYID ETWRDNPILP QDPYERTMAR
101: FWSKFVDEQI YVTAMKVVGK TGKERDAVVE ATRDLLMFLE KELVGKDFLG GKSLGFVDIV ATLVAFWLMR TEEIVGVKVV PVEKFPEIHR WVKNLLGNDV
201: IKKCIPPEDE HLKYIRARME KLNIKSA

Arabidopsis Description

GSTU7Glutathione S-transferase U7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.