CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 3
vacuole 2
mitochondrion 2
extracellular 3
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34584	Soybean	cytosol	63.56	70.4
KRH62274	Soybean	extracellular	23.48	56.31
KRH49219	Soybean	cytosol	19.43	48.48
KRH54547	Soybean	cytosol	21.86	46.96
KRH75749	Soybean	cytosol	36.44	41.1
KRH62422	Soybean	cytosol	36.03	40.45
KRG90592	Soybean	cytosol	35.22	39.19
KRH62423	Soybean	cytosol	35.63	38.94
KRH49218	Soybean	cytosol	34.41	38.46
KRH00072	Soybean	cytosol	34.01	37.84
KRH59018	Soybean	cytosol	33.2	37.79
KRH19667	Soybean	endoplasmic reticulum, extracellular	34.01	37.67
KRH49213	Soybean	cytosol, endoplasmic reticulum	34.01	37.33
KRH00071	Soybean	nucleus	34.01	37.33
KRH75750	Soybean	cytosol, nucleus	34.01	37.17
KRH59019	Soybean	cytosol	33.6	37.05
KRH49221	Soybean	cytosol, extracellular	33.6	36.89
KRH49214	Soybean	cytosol	33.6	36.89
KRH00075	Soybean	cytosol	33.6	36.89
KRH49212	Soybean	cytosol, nucleus	33.6	36.73
KRH49222	Soybean	cytosol	29.55	36.68
KRH52989	Soybean	cytosol	23.08	36.54
KRH19668	Soybean	cytosol, endoplasmic reticulum, mitochondrion	29.55	36.5
KRH49224	Soybean	cytosol	33.2	36.44
KRH49216	Soybean	cytosol	33.2	36.44
KRH42902	Soybean	cytosol	33.2	36.28
KRH59020	Soybean	cytosol	33.6	36.24
KRH49215	Soybean	cytosol, nucleus	33.2	35.81
KRH59021	Soybean	cytosol, nucleus	31.98	35.27
KRH42903	Soybean	cytosol	32.39	35.09
KRH72040	Soybean	cytosol	31.17	34.22
Solyc12g097080.1.1	Tomato	cytosol, endoplasmic reticulum	29.96	33.48
KRH17938	Soybean	cytosol	19.84	31.61
KRH54548	Soybean	cytosol	29.96	31.49
PGSC0003DMT400022251	Potato	cytosol	22.67	30.11
KRH42905	Soybean	cytosol	32.79	28.42
KRH62275	Soybean	cytosol	8.5	18.58

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	EMBL:ACUP02012735	EnsemblPlantsGene:GLYMA_20G197600	GO:GO:0003674
GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009407	GO:GO:0009987	GO:GO:0016740	GO:GO:0019748	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf
InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	UniProt:K7N4I9	EnsemblPlants:KRG92200	ProteinID:KRG92200
ProteinID:KRG92200.1	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF496
SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI0002955482	:	:

Description

hypothetical protein

Coordinates

chr20:+:43503132..43504645

Molecular Weight (calculated)

29513.3 Da

IEP (calculated)

9.477

GRAVY (calculated)

-0.127

Length

247 amino acids

Sequence
(BLAST)

001: MAEVKLHGFW YNLFTLRVVW TLKLKGIPYL NIEKDRYNKS LQLLEYNPVY RKTPVLVHNG KPLCESMLIV EYIDEIWPHN SLLPADTYER ALARFWIKYA
101: DEIFPAVSAF FSSNNDEERE KSIEKIWEHL RVVENQCFGD QKKFFGGDII NIVEIDFGSI FKFLVAEDIL KRRSWKMRNS LTCTHGIIIS RMFQLLKKTS
201: QTMRKWWLLL SLLEKNVWHL PKKVIYIRSS MNESLCICLN RFFMRVC

Best Arabidopsis Sequence Match ( AT2G29460.1 )
(BLAST)

001: MAEKEEDVKL LGFWASPFTR RVEMAFKLKG VPYEYLEQDI VNKSPLLLQI NPVYKKVPVL VYKGKILSES HVILEYIDQI WKNNPILPQD PYEKAMALFW
101: AKFVDEQVGP VAFMSVAKAE KGVEVAIKEA QELFMFLEKE VTGKDFFGGK TIGFLDLVAG SMIPFCLARG WEGMGIDMIP EEKFPELNRW IKNLKEIEIV
201: RECIPPREEQ IEHMKKVVER IKSA

Arabidopsis Description

GSTU4Glutathione S-transferase U4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW27]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.