CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49221	Soybean	cytosol, extracellular	87.11	87.11
KRH49222	Soybean	cytosol	76.44	86.43
KRH49219	Soybean	cytosol	37.78	85.86
KRH49224	Soybean	cytosol	85.78	85.78
KRH00071	Soybean	nucleus	83.11	83.11
KRH49213	Soybean	cytosol, endoplasmic reticulum	83.11	83.11
KRH49214	Soybean	cytosol	82.67	82.67
KRH49215	Soybean	cytosol, nucleus	83.11	81.66
KRH49212	Soybean	cytosol, nucleus	81.33	80.97
KRH49216	Soybean	cytosol	80.89	80.89
KRH17938	Soybean	cytosol	53.33	77.42
KRH00072	Soybean	cytosol	71.56	72.52
KRH49218	Soybean	cytosol	70.22	71.49
KRH75749	Soybean	cytosol	67.11	68.95
KRH62422	Soybean	cytosol	67.11	68.64
KRH62274	Soybean	extracellular	29.33	64.08
KRH62423	Soybean	cytosol	63.56	63.27
KRH75750	Soybean	cytosol, nucleus	63.11	62.83
KRH54547	Soybean	cytosol	27.11	53.04
KRH72040	Soybean	cytosol	52.0	52.0
KRH59021	Soybean	cytosol, nucleus	49.78	50.0
KRH42903	Soybean	cytosol	48.89	48.25
KRH59020	Soybean	cytosol	48.89	48.03
KRH42902	Soybean	cytosol	48.0	47.79
KRH59018	Soybean	cytosol	45.78	47.47
KRH52989	Soybean	cytosol	32.89	47.44
KRH19668	Soybean	cytosol, endoplasmic reticulum, mitochondrion	41.33	46.5
KRH59019	Soybean	cytosol	45.33	45.54
KRG90592	Soybean	cytosol	44.44	45.05
KRH19667	Soybean	endoplasmic reticulum, extracellular	43.56	43.95
KRH34584	Soybean	cytosol	42.67	43.05
KRH54548	Soybean	cytosol	43.56	41.7
KRH42905	Soybean	cytosol	48.89	38.6
KRH62275	Soybean	cytosol	17.33	34.51
KRG92200	Soybean	extracellular	36.89	33.6

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:100500052	MapMan:18.8.1.4	Gene3D:3.40.30.10	EMBL:ACUP02011374	EnsemblPlantsGene:GLYMA_18G190500
GO:GO:0003674	GO:GO:0003824	GO:GO:0004364	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006749	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009407	GO:GO:0009987	GO:GO:0016740	GO:GO:0019748	InterPro:GST_C
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	UniProt:I1N2P6	InterPro:IPR004045	InterPro:IPR010987
EMBL:KM818468	EnsemblPlants:KRH00075	ProteinID:KRH00075	ProteinID:KRH00075.1	PFAM:PF00043	PFAM:PF02798
PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF486	SUPFAM:SSF47616	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI0001BA894B	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:46026048..46027622

Molecular Weight (calculated)

25696.9 Da

IEP (calculated)

5.462

GRAVY (calculated)

-0.164

Length

225 amino acids

Sequence
(BLAST)

001: MASSQEEVTL LGVIGSPFAC RVKIALKLKG VEYKYVEENL ANKSDLLLKS NPVHKKVPVF IHNEKPIAES LVIVEYIDET WKNNPILPSD PYQRALARFW
101: SKFIDDKIVG AAWNAVFTVD EKEREKNVVE TYEALQFLEN EIKDKKFFGG EEVGLVDIAG VYIAFWVPLI QEIAGLELLS SEKFPKLYKW SQEFVNHPIV
201: KEGLPPRDPV FAFFKGRYES LSASR

Best Arabidopsis Sequence Match ( AT2G29490.1 )
(BLAST)

001: MAEKEESVKL LGFWASPFSR RVEMALKLKG VPYEYLEEDL PNKTPLLLEL NPLHKKVPVL VHNDKILLES HLILEYIDQT WKNSPILPQD PYEKAMARFW
101: AKFIDDQILT LGFRSLVKAE KGREVAIEET RELLMFLEKE VTGKDFFGGK TIGFLDMIAG SMIPFCLARL WKGIGIDMIP EEKFPELNRW IKNLEEVEAV
201: RGCIPPREKQ IERMTKIAET IKSA

Arabidopsis Description

GSTU1Glutathione S-transferase U1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.