CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH62422	Soybean	cytosol	96.35	95.91
KRH49219	Soybean	cytosol	30.59	67.68
KRH00075	Soybean	cytosol	68.95	67.11
KRH00071	Soybean	nucleus	67.58	65.78
KRH49213	Soybean	cytosol, endoplasmic reticulum	67.58	65.78
KRH49212	Soybean	cytosol, nucleus	67.58	65.49
KRH49216	Soybean	cytosol	67.12	65.33
KRH49214	Soybean	cytosol	67.12	65.33
KRH62274	Soybean	extracellular	30.59	65.05
KRH49224	Soybean	cytosol	66.67	64.89
KRH49221	Soybean	cytosol, extracellular	66.67	64.89
KRH49215	Soybean	cytosol, nucleus	66.21	63.32
KRH49222	Soybean	cytosol	57.53	63.32
KRH00072	Soybean	cytosol	62.56	61.71
KRH62423	Soybean	cytosol	61.64	59.73
KRH49218	Soybean	cytosol	60.27	59.73
KRH17938	Soybean	cytosol	42.01	59.35
KRH54547	Soybean	cytosol	31.05	59.13
KRH75750	Soybean	cytosol, nucleus	60.27	58.41
KRH52989	Soybean	cytosol	37.9	53.21
KRH59021	Soybean	cytosol, nucleus	50.68	49.55
KRH72040	Soybean	cytosol	49.32	48.0
KRH42903	Soybean	cytosol	49.77	47.81
KRH59020	Soybean	cytosol	49.32	47.16
KRH59018	Soybean	cytosol	46.12	46.54
KRH59019	Soybean	cytosol	47.03	45.98
KRH34584	Soybean	cytosol	46.58	45.74
KRH42902	Soybean	cytosol	47.03	45.58
KRG90592	Soybean	cytosol	46.12	45.5
KRH19668	Soybean	cytosol, endoplasmic reticulum, mitochondrion	41.1	45.0
KRH19667	Soybean	endoplasmic reticulum, extracellular	43.38	42.6
KRH62275	Soybean	cytosol	21.0	40.71
KRH54548	Soybean	cytosol	42.92	40.0
KRH42905	Soybean	cytosol	48.4	37.19
KRG92200	Soybean	extracellular	41.1	36.44

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:100527381	MapMan:18.8.1.4	Gene3D:3.40.30.10	EMBL:ACUP02000476	EMBL:BT092221
UniProt:C6T460	ncoils:Coil	EnsemblPlantsGene:GLYMA_01G106000	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987
GO:GO:0016740	GO:GO:0019748	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	EMBL:KM818427	EnsemblPlants:KRH75749	ProteinID:KRH75749	ProteinID:KRH75749.1
PFAM:PF00043	PFAM:PF02798	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF486
SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000189D759	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:35856268..35858442

Molecular Weight (calculated)

25032.1 Da

IEP (calculated)

5.755

GRAVY (calculated)

-0.247

Length

219 amino acids

Sequence
(BLAST)

001: MASNHEEVIL LGKWASPFSN RVDLALKLKG VPYKYSEEDL ANKSADLLRY NPVHKKVPVL VHNGNPLPES LIIVEYIDET WKNNPLLPRD PYERALARFW
101: SKTLDDKILP AIWNACWSDE NGREKAVEEA LEALKILQEA LKDKKFFGGE SIGLVDIAAN FIGYWVAILQ EIAGLELLTI EKFPKLYKWS QEFINHPVIK
201: EGLPPRDELF AFFQASAKK

Best Arabidopsis Sequence Match ( AT3G09270.1 )
(BLAST)

001: MNQEEHVKLL GLWGSPFSKR VEMVLKLKGI PYEYIEEDVY GNRSPMLLKY NPIHKKVPVL IHNGRSIAES LVIVEYIEDT WKTTHTILPQ DPYERAMARF
101: WAKYVDEKVM LAVKKACWGP ESEREKEVKE AYEGLKCLEK ELGDKLFFGG ETIGFVDIAA DFIGYWLGIF QEASGVTIMT AEEFPKLQRW SEDFVGNNFI
201: KEVLPPKEKL VAVLKAMFGS VTSN

Arabidopsis Description

GSTU8Glutathione S-transferase U8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR36]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.