Factsheet for PGSC0003DMT400022251

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
vacuole 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g097080.1.1	Tomato	cytosol, endoplasmic reticulum	90.86	76.47
PGSC0003DMT400094155	Potato	cytosol	52.15	43.5
PGSC0003DMT400005534	Potato	cytosol	19.89	36.63
PGSC0003DMT400005552	Potato	cytosol	41.94	35.45
PGSC0003DMT400004540	Potato	cytosol	41.94	34.67
PGSC0003DMT400005536	Potato	cytosol	39.25	33.64
PGSC0003DMT400005549	Potato	cytosol	38.71	33.49
PGSC0003DMT400004531	Potato	cytosol	40.32	33.33
KRH34584	Soybean	cytosol	39.78	33.18
PGSC0003DMT400005542	Potato	cytosol	38.71	33.18
PGSC0003DMT400005547	Potato	cytosol	38.17	32.72
PGSC0003DMT400005544	Potato	cytosol	37.63	32.26
PGSC0003DMT400064983	Potato	cytosol	38.71	32.14
PGSC0003DMT400005551	Potato	mitochondrion	37.63	32.11
PGSC0003DMT400005572	Potato	cytosol	38.71	32.0
PGSC0003DMT400005538	Potato	cytosol	34.95	31.55
PGSC0003DMT400074054	Potato	cytosol	38.17	31.42
PGSC0003DMT400005561	Potato	cytosol	29.57	31.07
PGSC0003DMT400005546	Potato	cytosol	36.02	30.73
PGSC0003DMT400005558	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.1	30.67
PGSC0003DMT400005532	Potato	cytosol	36.56	30.63
PGSC0003DMT400005557	Potato	cytosol	36.02	30.59
PGSC0003DMT400011275	Potato	cytosol	26.34	30.43
PGSC0003DMT400063686	Potato	cytosol	36.56	30.36
PGSC0003DMT400028619	Potato	cytosol	36.02	30.32
PGSC0003DMT400005571	Potato	cytosol	36.56	30.09
PGSC0003DMT400051271	Potato	cytosol	36.02	29.52
PGSC0003DMT400050289	Potato	cytosol	36.56	29.18
PGSC0003DMT400030631	Potato	cytosol	36.02	28.88
PGSC0003DMT400051375	Potato	cytosol	34.41	28.07
KRG92200	Soybean	extracellular	30.11	22.67
PGSC0003DMT400006306	Potato	cytosol	14.52	21.77

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045	InterPro:IPR010987	UniProt:M1AGF6
PFAM:PF02798	EnsemblPlantsGene:PGSC0003DMG400008631	PGSC:PGSC0003DMG400008631	EnsemblPlants:PGSC0003DMT400022251	PFscan:PS50404	PFscan:PS50405
PANTHER:PTHR11260	PANTHER:PTHR11260:SF345	SUPFAM:SSF47616	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000295C37D

Description

Glutathione s-transferase [Source:PGSC_GENE;Acc:PGSC0003DMG400008631]

Coordinates

chr12:+:58780123..58781276

Molecular Weight (calculated)

21723.3 Da

IEP (calculated)

7.059

GRAVY (calculated)

-0.410

Length

186 amino acids

Sequence
(BLAST)

001: MSKKSPLLVK YNPIHKKVPV LIHGDKTICE SMVIVEYINE MWQLNPLLST DSYERATSRF WVKYIEEKSH NTWNVFCNTG EKQQNAIKES LEMFKTIEEN
101: ALGENNILFG GENIGLVDIA FGGYSHWMEI IEEIVGVKLL DPHNFPRINK WIKNFKEVKA IKDNLPNRDE MFVYMKNARE RMLASP

Best Arabidopsis Sequence Match ( AT1G78320.1 )
(BLAST)

001: MEEEIILLDY WASMYGMRTR IALEEKKVKY EYREEDLSNK SPLLLQMNPI HKKIPVLIHE GKPICESIIQ VQYIDELWPD TNPILPSDPY QRAQARFWAD
101: YIDKKTYVPC KALWSESGEK QEAAKIEFIE VLKTLDSELG DKYYFGGNEF GLVDIAFIGF YSWFRTYEEV ANLSIVLEFP KLMAWAQRCL KRESVAKALP
201: DSDKVLKSVS DHRKIILGID

Arabidopsis Description

GSTU23Glutathione S-transferase U23 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9F1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.