Factsheet for PGSC0003DMT400005532

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
vacuole 1
mitochondrion 3
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g011540.2.1	Tomato	cytosol	92.34	92.34
PGSC0003DMT400005534	Potato	cytosol	36.04	79.21
PGSC0003DMT400028619	Potato	cytosol	70.72	71.04
PGSC0003DMT400005547	Potato	cytosol	65.32	66.82
PGSC0003DMT400005552	Potato	cytosol	66.22	66.82
PGSC0003DMT400005544	Potato	cytosol	62.61	64.06
PGSC0003DMT400005558	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.86	64.0
PGSC0003DMT400005557	Potato	cytosol	63.06	63.93
PGSC0003DMT400005551	Potato	mitochondrion	62.61	63.76
PGSC0003DMT400005549	Potato	cytosol	61.71	63.72
PGSC0003DMT400005538	Potato	cytosol	59.01	63.59
PGSC0003DMT400051271	Potato	cytosol	63.96	62.56
PGSC0003DMT400005542	Potato	cytosol	60.81	62.21
PGSC0003DMT400005536	Potato	cytosol	60.81	62.21
PGSC0003DMT400005561	Potato	cytosol	48.2	60.45
PGSC0003DMT400005572	Potato	cytosol	60.81	60.0
PGSC0003DMT400005546	Potato	cytosol	58.56	59.63
PGSC0003DMT400011275	Potato	cytosol	43.24	59.63
PGSC0003DMT400005571	Potato	cytosol	59.91	58.85
PGSC0003DMT400064983	Potato	cytosol	48.2	47.77
PGSC0003DMT400004531	Potato	cytosol	47.3	46.67
PGSC0003DMT400030631	Potato	cytosol	43.24	41.38
PGSC0003DMT400094155	Potato	cytosol	40.54	40.36
PGSC0003DMT400074054	Potato	cytosol	40.99	40.27
PGSC0003DMT400004540	Potato	cytosol	40.54	40.0
PGSC0003DMT400063686	Potato	cytosol	39.64	39.29
PGSC0003DMT400051375	Potato	cytosol	38.74	37.72
PGSC0003DMT400022251	Potato	cytosol	30.63	36.56
PGSC0003DMT400050289	Potato	cytosol	34.68	33.05
PGSC0003DMT400006306	Potato	cytosol	12.16	21.77

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:102598723	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	UniProt:M0ZQ14	PFAM:PF00043	PFAM:PF02798	EnsemblPlantsGene:PGSC0003DMG400002163	PGSC:PGSC0003DMG400002163
EnsemblPlants:PGSC0003DMT400005532	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF486	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000296FC55	RefSeq:XP_006367668.1	:	:

Description

Glutathione S-transferase [Source:PGSC_GENE;Acc:PGSC0003DMG400002163]

Coordinates

chr9:-:1037326..1038412

Molecular Weight (calculated)

25338.6 Da

IEP (calculated)

4.600

GRAVY (calculated)

-0.136

Length

222 amino acids

Sequence
(BLAST)

001: MVDQVRLLGV SGSSYSRRVE WALRVKGVKY EFIEVDLQNK SSLLLESNPV LKKIPVLIHN GNPICESIVI VEYIDETFEG PSILPKDPYD RAIARFWAKF
101: LDGKCLEAVG KALWCKGEEQ EKNIQEEAYE MLKIVDNELK DKKFFSGDKI GFVDVAANYI PFWVEIVEEA TGNVLITSEK FPNLCAWIDE YLKCSEVQEN
201: LPDRDMMLSF FKAKALAEIT AK

Best Arabidopsis Sequence Match ( AT1G78380.1 )
(BLAST)

001: MANEVILLDF WPSMFGMRTR IALREKGVEF EYREEDLRNK SPLLLQMNPI HKKIPVLIHN GKPVNESIIQ VQYIDEVWSH KNPILPSDPY LRAQARFWAD
101: FIDKKLYDAQ RKVWATKGEE QEAGKKDFIE ILKTLESELG DKPYFSGDDF GYVDIALIGF YTWFPAYEKF ANFSIESEVP KLIAWVKKCL QRESVAKSLP
201: DPEKVTEFVS ELRKKFVPE

Arabidopsis Description

GSTU19GSTU19 [Source:UniProtKB/TrEMBL;Acc:A0A178W4K6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.