Factsheet for PGSC0003DMT400028619

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g084960.1.1	Tomato	cytosol	91.4	91.4
PGSC0003DMT400005534	Potato	cytosol	36.2	79.21
PGSC0003DMT400005532	Potato	cytosol	71.04	70.72
PGSC0003DMT400005544	Potato	cytosol	66.97	68.2
PGSC0003DMT400005552	Potato	cytosol	67.87	68.18
PGSC0003DMT400005547	Potato	cytosol	66.06	67.28
PGSC0003DMT400005557	Potato	cytosol	66.06	66.67
PGSC0003DMT400005558	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	67.87	66.67
PGSC0003DMT400051271	Potato	cytosol	68.33	66.52
PGSC0003DMT400005538	Potato	cytosol	61.99	66.5
PGSC0003DMT400005542	Potato	cytosol	64.25	65.44
PGSC0003DMT400011275	Potato	cytosol	47.06	64.6
PGSC0003DMT400005551	Potato	mitochondrion	62.9	63.76
PGSC0003DMT400005549	Potato	cytosol	61.99	63.72
PGSC0003DMT400005536	Potato	cytosol	62.44	63.59
PGSC0003DMT400005546	Potato	cytosol	61.99	62.84
PGSC0003DMT400005571	Potato	cytosol	62.9	61.5
PGSC0003DMT400005572	Potato	cytosol	61.54	60.44
PGSC0003DMT400005561	Potato	cytosol	47.06	58.76
PGSC0003DMT400064983	Potato	cytosol	48.87	48.21
PGSC0003DMT400004531	Potato	cytosol	47.96	47.11
PGSC0003DMT400030631	Potato	cytosol	48.42	46.12
PGSC0003DMT400074054	Potato	cytosol	44.8	43.81
PGSC0003DMT400004540	Potato	cytosol	43.44	42.67
PGSC0003DMT400094155	Potato	cytosol	39.37	39.01
PGSC0003DMT400063686	Potato	cytosol	38.46	37.95
PGSC0003DMT400051375	Potato	cytosol	38.91	37.72
PGSC0003DMT400022251	Potato	cytosol	30.32	36.02
PGSC0003DMT400050289	Potato	cytosol	37.1	35.19
PGSC0003DMT400006306	Potato	cytosol	14.03	25.0

Protein Annotations

Gene3D:1.20.1050.10	EntrezGene:102587200	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N	InterPro:IPR004045
InterPro:IPR010987	UniProt:M1ARE1	PFAM:PF00043	PFAM:PF02798	EnsemblPlantsGene:PGSC0003DMG400011012	PGSC:PGSC0003DMG400011012
EnsemblPlants:PGSC0003DMT400028619	PFscan:PS50404	PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF486	SUPFAM:SSF47616
SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000295C192	RefSeq:XP_006339006.1	SEG:seg	:

Description

Glutathione-S-transferase [Source:PGSC_GENE;Acc:PGSC0003DMG400011012]

Coordinates

chr10:-:54139825..54140950

Molecular Weight (calculated)

25170.3 Da

IEP (calculated)

4.815

GRAVY (calculated)

-0.195

Length

221 amino acids

Sequence
(BLAST)

001: MSGVKLLGVN GSPASQRVEW ALKIKGVKYE FITEDLQNKS PLLLKSNPVY KKIPVLLHNE NPISESLVII EYIDEAFEGP SILPKDPYDK AIARFWAKFL
101: DDKCLPAVWK ALWSQGEEQE KDKEEAYEVL KVLDNELKDK KFFGGDNIGF VDIVANFVGF WIEIVEEATG VVLVTSEKFP NFCVWRDEYL NCDKVKENMP
201: SREMLLGFFK SRVQAAAATL K

Best Arabidopsis Sequence Match ( AT3G09270.1 )
(BLAST)

001: MNQEEHVKLL GLWGSPFSKR VEMVLKLKGI PYEYIEEDVY GNRSPMLLKY NPIHKKVPVL IHNGRSIAES LVIVEYIEDT WKTTHTILPQ DPYERAMARF
101: WAKYVDEKVM LAVKKACWGP ESEREKEVKE AYEGLKCLEK ELGDKLFFGG ETIGFVDIAA DFIGYWLGIF QEASGVTIMT AEEFPKLQRW SEDFVGNNFI
201: KEVLPPKEKL VAVLKAMFGS VTSN

Arabidopsis Description

GSTU8Glutathione S-transferase U8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR36]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.