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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • vacuole 1
  • mitochondrion 4
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400028619 Potato cytosol 91.4 91.4
Solyc12g036560.1.1 Tomato cytosol 36.2 72.73
Solyc09g011540.2.1 Tomato cytosol 68.78 68.47
Solyc09g011590.2.1 Tomato cytosol 66.06 67.28
Solyc09g011550.2.1 Tomato cytosol 66.52 67.12
Solyc09g011570.2.1 Tomato cytosol 62.44 65.71
Solyc09g011500.2.1 Tomato cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 65.61 65.32
Solyc09g011490.2.1 Tomato cytosol 64.71 65.3
Solyc09g011580.2.1 Tomato cytosol, plastid 63.35 64.52
Solyc09g011640.2.1 Tomato cytosol 63.8 64.09
Solyc09g011560.2.1 Tomato cytosol 62.9 64.06
Solyc09g011620.1.1 Tomato cytosol 61.54 63.26
Solyc09g011520.2.1 Tomato cytosol 62.9 61.78
Solyc09g011630.2.1 Tomato cytosol, mitochondrion 60.63 61.47
Solyc09g011510.2.1 Tomato cytosol 42.99 60.13
Solyc09g011600.2.1 Tomato cytosol 58.82 59.91
Solyc01g086680.2.1 Tomato cytosol 51.58 50.89
Solyc01g081310.2.1 Tomato cytosol 48.42 47.56
Solyc06g069040.2.1 Tomato cytosol 46.15 45.13
Solyc09g063150.2.1 Tomato cytosol 43.89 44.09
Solyc09g011650.2.1 Tomato cytosol 42.99 42.99
Solyc01g081270.2.1 Tomato cytosol, endoplasmic reticulum 42.99 42.6
Solyc09g091130.2.1 Tomato cytosol 42.08 41.52
Solyc08g062570.1.1 Tomato cytosol 25.79 41.3
Solyc12g097080.1.1 Tomato cytosol, endoplasmic reticulum 39.82 39.82
Solyc09g091140.2.1 Tomato cytosol 39.37 39.01
Solyc01g099590.2.1 Tomato cytosol 37.56 37.05
Solyc03g116130.1.1 Tomato cytosol 37.1 35.19
Solyc03g116120.1.1 Tomato cytosol 32.58 32.14
Solyc12g062730.1.1 Tomato cytosol 26.24 28.71
Solyc07g021460.1.1 Tomato cytosol 23.53 28.11
Protein Annotations
Gene3D:1.20.1050.10MapMan:18.8.1.4Gene3D:3.40.30.10GO:GO:0003674GO:GO:0003824GO:GO:0004364
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0006749GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009407GO:GO:0009987
GO:GO:0016740GO:GO:0019748InterPro:GST_CInterPro:Glutathione-S-Trfase_C-likeInterPro:Glutathione-S-Trfase_C_sfInterPro:Glutathione_S-Trfase_N
InterPro:IPR004045InterPro:IPR010987UniProt:K4D3T0PFAM:PF00043PFAM:PF02798PFscan:PS50404
PFscan:PS50405PANTHER:PTHR11260PANTHER:PTHR11260:SF486SUPFAM:SSF47616SUPFAM:SSF52833EnsemblPlantsGene:Solyc10g084960.1
EnsemblPlants:Solyc10g084960.1.1InterPro:Thioredoxin-like_sfUniParc:UPI000276A5A0:::
Description
No Description!
Coordinates
chr10:+:64311825..64313183
Molecular Weight (calculated)
25288.5 Da
IEP (calculated)
5.041
GRAVY (calculated)
-0.186
Length
221 amino acids
Sequence
(BLAST)
001: MSRVKLLGVY GSPASQRVEW ALKIKGVKYE FITEDLQNKS PLLLKSNPVY KKIPVLLHND KPIAESLVII EYIDEAFEGP SILPKDPYDR AIARFWVKFL
101: DEKCLPAVWK ALWSQGDEQE KDKEEAYEVL KVIDNELKDK KFFGGDNIGF VDVVANFVGF WIGIVEEATG VVLVTSENFP NFCAWRDEYL NCDRVKENMP
201: SREMLLGYFK SRVQAVAAIS K
Best Arabidopsis Sequence Match ( AT3G09270.1 )
(BLAST)
001: MNQEEHVKLL GLWGSPFSKR VEMVLKLKGI PYEYIEEDVY GNRSPMLLKY NPIHKKVPVL IHNGRSIAES LVIVEYIEDT WKTTHTILPQ DPYERAMARF
101: WAKYVDEKVM LAVKKACWGP ESEREKEVKE AYEGLKCLEK ELGDKLFFGG ETIGFVDIAA DFIGYWLGIF QEASGVTIMT AEEFPKLQRW SEDFVGNNFI
201: KEVLPPKEKL VAVLKAMFGS VTSN
Arabidopsis Description
GSTU8Glutathione S-transferase U8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR36]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.