Factsheet for Solyc09g011570.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400005538	Potato	cytosol	81.9	83.5
Solyc09g011580.2.1	Tomato	cytosol, plastid	80.48	77.88
Solyc09g011590.2.1	Tomato	cytosol	79.05	76.5
Solyc09g011600.2.1	Tomato	cytosol	78.57	76.04
Solyc12g036560.1.1	Tomato	cytosol	39.52	75.45
Solyc09g011550.2.1	Tomato	cytosol	78.57	75.34
Solyc09g011620.1.1	Tomato	cytosol	76.67	74.88
Solyc09g011560.2.1	Tomato	cytosol	74.29	71.89
Solyc09g011490.2.1	Tomato	cytosol	73.33	70.32
Solyc09g011500.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	70.95	67.12
Solyc09g011510.2.1	Tomato	cytosol	50.0	66.46
Solyc09g011640.2.1	Tomato	cytosol	69.52	66.36
Solyc09g011520.2.1	Tomato	cytosol	70.48	65.78
Solyc09g011630.2.1	Tomato	cytosol, mitochondrion	67.62	65.14
Solyc10g084960.1.1	Tomato	cytosol	65.71	62.44
Solyc09g011540.2.1	Tomato	cytosol	61.9	58.56
Solyc01g086680.2.1	Tomato	cytosol	54.29	50.89
Solyc09g091130.2.1	Tomato	cytosol	49.52	46.43
Solyc09g063150.2.1	Tomato	cytosol	47.62	45.45
Solyc01g081310.2.1	Tomato	cytosol	47.62	44.44
Solyc01g081270.2.1	Tomato	cytosol, endoplasmic reticulum	47.14	44.39
Solyc08g062570.1.1	Tomato	cytosol	28.57	43.48
Solyc09g011650.2.1	Tomato	cytosol	44.29	42.08
Solyc06g069040.2.1	Tomato	cytosol	45.24	42.04
Solyc12g097080.1.1	Tomato	cytosol, endoplasmic reticulum	41.43	39.37
Solyc01g099590.2.1	Tomato	cytosol	40.48	37.95
Solyc09g091140.2.1	Tomato	cytosol	39.52	37.22
Solyc03g116120.1.1	Tomato	cytosol	37.14	34.82
Solyc03g116130.1.1	Tomato	cytosol	38.57	34.76
Solyc12g062730.1.1	Tomato	cytosol	27.62	28.71
Solyc07g021460.1.1	Tomato	cytosol	23.81	27.03

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987
GO:GO:0016740	GO:GO:0019748	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:K4CRI3	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF486	SUPFAM:SSF47616	SUPFAM:SSF52833	EnsemblPlantsGene:Solyc09g011570.2
EnsemblPlants:Solyc09g011570.2.1	InterPro:Thioredoxin-like_sf	UniParc:UPI000276B33D	SEG:seg	:	:

Description

No Description!

Coordinates

chr9:+:4857466..4858799

Molecular Weight (calculated)

24507.8 Da

IEP (calculated)

5.920

GRAVY (calculated)

-0.189

Length

210 amino acids

Sequence
(BLAST)

001: MGDVKLLGLW YSPFSHRVEW ALKFKGVQYE FIEQDLQNKS PILLESNPIY KKVPVLIHNG KPICESIVIL EYIDEVFEGP SILPKDPYNR ALARFWVKFF
101: EDKGPSMRKS ILLKGEEQEK AKEEVFEMLR ILDNELKGKK FFVGDKFGFV DIVANAGALW LGVLEEVSGV VLVTKEKFPN FCVWRDEYCT QNKEYLPSRD
201: ELLIRFKTYI

Best Arabidopsis Sequence Match ( AT2G29420.1 )
(BLAST)

001: MAERSNSEEV KLLGMWASPF SRRIEIALTL KGVSYEFLEQ DITNKSSLLL QLNPVHKMIP VLVHNGKPIS ESLVILEYID ETWRDNPILP QDPYERTMAR
101: FWSKFVDEQI YVTAMKVVGK TGKERDAVVE ATRDLLMFLE KELVGKDFLG GKSLGFVDIV ATLVAFWLMR TEEIVGVKVV PVEKFPEIHR WVKNLLGNDV
201: IKKCIPPEDE HLKYIRARME KLNIKSA

Arabidopsis Description

GSTU7Glutathione S-transferase U7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.