Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- vacuole 1
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400005571 | Potato | cytosol | 84.89 | 84.51 |
| Solyc12g036560.1.1 | Tomato | cytosol | 36.89 | 75.45 |
| Solyc09g011500.2.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 72.89 | 73.87 |
| Solyc09g011490.2.1 | Tomato | cytosol | 71.56 | 73.52 |
| Solyc09g011570.2.1 | Tomato | cytosol | 65.78 | 70.48 |
| Solyc09g011590.2.1 | Tomato | cytosol | 67.56 | 70.05 |
| Solyc09g011510.2.1 | Tomato | cytosol | 48.89 | 69.62 |
| Solyc09g011550.2.1 | Tomato | cytosol | 67.56 | 69.41 |
| Solyc09g011620.1.1 | Tomato | cytosol | 65.78 | 68.84 |
| Solyc09g011600.2.1 | Tomato | cytosol | 65.33 | 67.74 |
| Solyc09g011580.2.1 | Tomato | cytosol, plastid | 65.33 | 67.74 |
| Solyc09g011560.2.1 | Tomato | cytosol | 64.89 | 67.28 |
| Solyc09g011640.2.1 | Tomato | cytosol | 62.22 | 63.64 |
| Solyc10g084960.1.1 | Tomato | cytosol | 61.78 | 62.9 |
| Solyc09g011630.2.1 | Tomato | cytosol, mitochondrion | 59.56 | 61.47 |
| Solyc09g011540.2.1 | Tomato | cytosol | 56.44 | 57.21 |
| Solyc01g086680.2.1 | Tomato | cytosol | 48.89 | 49.11 |
| Solyc01g081310.2.1 | Tomato | cytosol | 46.67 | 46.67 |
| Solyc08g062570.1.1 | Tomato | cytosol | 26.67 | 43.48 |
| Solyc06g069040.2.1 | Tomato | cytosol | 43.11 | 42.92 |
| Solyc09g063150.2.1 | Tomato | cytosol | 41.78 | 42.73 |
| Solyc01g081270.2.1 | Tomato | cytosol, endoplasmic reticulum | 41.33 | 41.7 |
| Solyc09g091130.2.1 | Tomato | cytosol | 41.33 | 41.52 |
| Solyc12g097080.1.1 | Tomato | cytosol, endoplasmic reticulum | 40.44 | 41.18 |
| Solyc09g011650.2.1 | Tomato | cytosol | 39.56 | 40.27 |
| Solyc01g099590.2.1 | Tomato | cytosol | 37.78 | 37.95 |
| Solyc09g091140.2.1 | Tomato | cytosol | 36.89 | 37.22 |
| Solyc03g116120.1.1 | Tomato | cytosol | 35.56 | 35.71 |
| Solyc03g116130.1.1 | Tomato | cytosol | 36.0 | 34.76 |
| Solyc12g062730.1.1 | Tomato | cytosol | 28.89 | 32.18 |
| Solyc07g021460.1.1 | Tomato | cytosol | 23.11 | 28.11 |
Protein Annotations
| Gene3D:1.20.1050.10 | MapMan:18.8.1.4 | Gene3D:3.40.30.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004364 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006749 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009407 | GO:GO:0009987 |
| GO:GO:0016740 | GO:GO:0019748 | InterPro:GST_C | InterPro:Glutathione-S-Trfase_C-like | InterPro:Glutathione-S-Trfase_C_sf | InterPro:Glutathione_S-Trfase_N |
| InterPro:IPR004045 | InterPro:IPR010987 | UniProt:K4CRH8 | PFAM:PF00043 | PFAM:PF02798 | PFscan:PS50404 |
| PFscan:PS50405 | PANTHER:PTHR11260 | PANTHER:PTHR11260:SF486 | SUPFAM:SSF47616 | SUPFAM:SSF52833 | EnsemblPlantsGene:Solyc09g011520.2 |
| EnsemblPlants:Solyc09g011520.2.1 | InterPro:Thioredoxin-like_sf | UniParc:UPI000276B338 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr9:-:4826832..4827949
Molecular Weight (calculated)
26040.6 Da
IEP (calculated)
6.295
GRAVY (calculated)
-0.203
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQVKLLGFW YSPFTHRVEW ALKIKGVKYE YIEEDRYNKS PLLLESNPIY KKVPVLIHNG KPICDSIVIL EYIDEIFEGP SILPKDPHER ALARFWAKFL
101: DDKVGAVVNT FLRKGEEQEK GKKEVCEMLK VLDNELKDKK LFVGDKLGFA DMVANLVGLW MSVFEEASEV VLATNENFPN FCAWRNTYIS CNQVKEYLPL
201: RIDELLAFYQ DRVRALATTL ATPQK
101: DDKVGAVVNT FLRKGEEQEK GKKEVCEMLK VLDNELKDKK LFVGDKLGFA DMVANLVGLW MSVFEEASEV VLATNENFPN FCAWRNTYIS CNQVKEYLPL
201: RIDELLAFYQ DRVRALATTL ATPQK
001: MAEKEEDVKL LGFWASPFTR RVEMAFKLKG VPYEYLEQDI VNKSPLLLQI NPVYKKVPVL VYKGKILSES HVILEYIDQI WKNNPILPQD PYEKAMALFW
101: AKFVDEQVGP VAFMSVAKAE KGVEVAIKEA QELFMFLEKE VTGKDFFGGK TIGFLDLVAG SMIPFCLARG WEGMGIDMIP EEKFPELNRW IKNLKEIEIV
201: RECIPPREEQ IEHMKKVVER IKSA
101: AKFVDEQVGP VAFMSVAKAE KGVEVAIKEA QELFMFLEKE VTGKDFFGGK TIGFLDLVAG SMIPFCLARG WEGMGIDMIP EEKFPELNRW IKNLKEIEIV
201: RECIPPREEQ IEHMKKVVER IKSA
Arabidopsis Description
GSTU4Glutathione S-transferase U4 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW27]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.