Factsheet for Solyc09g011580.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 5
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400005542	Potato	cytosol	91.24	91.24
Solyc09g011600.2.1	Tomato	cytosol	81.57	81.57
Solyc09g011570.2.1	Tomato	cytosol	77.88	80.48
Solyc09g011590.2.1	Tomato	cytosol	77.42	77.42
Solyc12g036560.1.1	Tomato	cytosol	39.17	77.27
Solyc09g011550.2.1	Tomato	cytosol	72.81	72.15
Solyc09g011620.1.1	Tomato	cytosol	69.59	70.23
Solyc09g011560.2.1	Tomato	cytosol	69.59	69.59
Solyc09g011490.2.1	Tomato	cytosol	69.12	68.49
Solyc09g011500.2.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	70.05	68.47
Solyc09g011640.2.1	Tomato	cytosol	67.74	66.82
Solyc09g011520.2.1	Tomato	cytosol	67.74	65.33
Solyc09g011510.2.1	Tomato	cytosol	47.47	65.19
Solyc09g011630.2.1	Tomato	cytosol, mitochondrion	65.44	65.14
Solyc10g084960.1.1	Tomato	cytosol	64.52	63.35
Solyc09g011540.2.1	Tomato	cytosol	59.45	58.11
Solyc01g086680.2.1	Tomato	cytosol	53.0	51.34
Solyc08g062570.1.1	Tomato	cytosol	30.41	47.83
Solyc01g081310.2.1	Tomato	cytosol	49.31	47.56
Solyc01g081270.2.1	Tomato	cytosol, endoplasmic reticulum	46.08	44.84
Solyc09g091130.2.1	Tomato	cytosol	46.08	44.64
Solyc06g069040.2.1	Tomato	cytosol	44.7	42.92
Solyc09g063150.2.1	Tomato	cytosol	43.32	42.73
Solyc09g011650.2.1	Tomato	cytosol	42.4	41.63
Solyc12g097080.1.1	Tomato	cytosol, endoplasmic reticulum	41.94	41.18
Solyc09g091140.2.1	Tomato	cytosol	38.71	37.67
Solyc01g099590.2.1	Tomato	cytosol	38.71	37.5
Solyc03g116130.1.1	Tomato	cytosol	39.17	36.48
Solyc03g116120.1.1	Tomato	cytosol	36.87	35.71
Solyc12g062730.1.1	Tomato	cytosol	29.03	31.19
Solyc07g021460.1.1	Tomato	cytosol	24.42	28.65

Protein Annotations

Gene3D:1.20.1050.10	MapMan:18.8.1.4	Gene3D:3.40.30.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004364
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006749	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009407	GO:GO:0009987
GO:GO:0016740	GO:GO:0019748	InterPro:GST_C	InterPro:Glutathione-S-Trfase_C-like	InterPro:Glutathione-S-Trfase_C_sf	InterPro:Glutathione_S-Trfase_N
InterPro:IPR004045	InterPro:IPR010987	UniProt:K4CRI4	PFAM:PF00043	PFAM:PF02798	PFscan:PS50404
PFscan:PS50405	PANTHER:PTHR11260	PANTHER:PTHR11260:SF486	SUPFAM:SSF47616	SUPFAM:SSF52833	EnsemblPlantsGene:Solyc09g011580.2
EnsemblPlants:Solyc09g011580.2.1	InterPro:Thioredoxin-like_sf	UniParc:UPI000276B33E	SEG:seg	:	:

Description

No Description!

Coordinates

chr9:+:4859444..4860733

Molecular Weight (calculated)

25371.4 Da

IEP (calculated)

4.919

GRAVY (calculated)

-0.324

Length

217 amino acids

Sequence
(BLAST)

001: MADIKLLGLW YSPFSKRVEW ALKTKGVEYE YIEDDLQNKS LLLLQSNPIH KKVPVLIHNG KPICESSVIL EYIDETFEGP SILPKDPYDR ALARFWAKFF
101: EDKWPSMMKS LFFKGEEQEK GKEEVNEMLK ILDNELKDKK FFVGNNFGFV DVVANAVALW FGVLEEVIGV VSVTSEKFPN FCDWRDEYYI QNKEYLPSRD
201: ELFAHYQAYI QRVAASK

Best Arabidopsis Sequence Match ( AT2G29420.1 )
(BLAST)

001: MAERSNSEEV KLLGMWASPF SRRIEIALTL KGVSYEFLEQ DITNKSSLLL QLNPVHKMIP VLVHNGKPIS ESLVILEYID ETWRDNPILP QDPYERTMAR
101: FWSKFVDEQI YVTAMKVVGK TGKERDAVVE ATRDLLMFLE KELVGKDFLG GKSLGFVDIV ATLVAFWLMR TEEIVGVKVV PVEKFPEIHR WVKNLLGNDV
201: IKKCIPPEDE HLKYIRARME KLNIKSA

Arabidopsis Description

GSTU7Glutathione S-transferase U7 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW24]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.