Factsheet for VIT_18s0122g00510.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_05s0020g04420.t01
VIT_06s0009g01910.t01
VIT_08s0040g00470.t01
VIT_09s0002g07160.t01
VIT_15s0045g01190.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G20950.1	VIT_06s0009g01910.t01	AT2G41100.1	17360592
AT1G20950.1	VIT_08s0040g00470.t01	AT2G41100.1	17360592
AT1G20950.1	VIT_05s0020g04420.t01	AT4G14640.1	17360592
AT1G20950.1	VIT_09s0002g07160.t01	AT5G65940.1	21798944
AT1G20950.1	VIT_15s0045g01190.t01	AT5G65940.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400075360	Potato	cytosol	88.8	88.65
Solyc12g095760.1.1	Tomato	cytosol, extracellular, nucleus, unclear	88.8	88.65
PGSC0003DMT400025919	Potato	cytosol	87.99	87.99
Solyc04g082880.2.1	Tomato	cytosol, nucleus, plastid, unclear	87.99	87.99
KRH49514	Soybean	cytosol, endoplasmic reticulum, nucleus	86.04	85.9
KRG89187	Soybean	endoplasmic reticulum	85.23	85.09
CDX88295	Canola	cytosol	83.28	83.14
AT1G20950.1	Thale cress	cytosol	82.47	82.74
CDY67022	Canola	cytosol	83.12	82.71
CDY67203	Canola	cytosol	82.95	82.55
Bra025858.1-P	Field mustard	cytosol	82.95	82.55
CDX87587	Canola	cytosol	82.63	82.5
Bra015734.1-P	Field mustard	cytosol	82.63	82.5
CDY33660	Canola	cytosol	80.03	82.44
CDX96611	Canola	cytosol	79.87	82.27
Os02t0714200-01	Rice	cytosol, plasma membrane	82.31	82.17
AT1G76550.1	Thale cress	cytosol	81.66	81.52
EES05627	Sorghum	cytosol	81.01	81.01
Os06t0326400-01	Rice	cytosol, plasma membrane, plastid	81.66	80.87
TraesCS6D01G259500.1	Wheat	golgi	80.52	80.52
Zm00001d017830_P001	Maize	cytosol	80.68	80.42
TraesCS6B01G307200.1	Wheat	cytosol	80.36	80.36
TraesCS6A01G279100.2	Wheat	cytosol	75.16	79.69
OQU76351	Sorghum	cytosol	79.71	79.07
TraesCS7B01G193600.1	Wheat	cytosol	77.6	78.23
TraesCS7A01G226000.2	Wheat	cytosol	77.6	78.23
TraesCS7D01G228500.1	Wheat	cytosol	77.44	78.07
HORVU6Hr1G070270.5	Barley	cytosol	80.68	76.23
Zm00001d045919_P001	Maize	mitochondrion	57.95	75.0
Zm00001d051629_P003	Maize	cytosol	75.32	74.36
HORVU7Hr1G047000.11	Barley	cytosol	77.11	71.21
TraesCS5A01G072700.2	Wheat	cytosol, golgi	68.51	67.95
HORVU5Hr1G019030.9	Barley	cytosol	68.51	67.85
Os09t0298100-00	Rice	plastid	67.53	67.1
Zm00001d032386_P003	Maize	cytosol	67.21	66.99
Os08t0345700-01	Rice	extracellular	67.05	66.94
KXG34347	Sorghum	cytosol	66.56	66.34
KXG35340	Sorghum	cytosol	66.88	65.29
GSMUA_AchrUn_...	Banana	cytosol	14.29	65.19
OQU80257	Sorghum	cytosol	55.19	63.43
TraesCS5D01G085500.2	Wheat	golgi	68.34	63.4
TraesCS5B01G078300.1	Wheat	golgi	68.02	63.1
Zm00001d020006_P001	Maize	cytosol	55.36	62.68
Zm00001d035883_P001	Maize	mitochondrion	9.09	58.33
Zm00001d004479_P001	Maize	mitochondrion	16.88	53.61
GSMUA_AchrUn_...	Banana	cytosol	8.28	51.0
Zm00001d008809_P001	Maize	cytosol	19.16	49.79
Zm00001d021503_P001	Maize	cytosol	23.05	49.31
Zm00001d015529_P001	Maize	mitochondrion	13.96	47.51
Zm00001d032792_P001	Maize	cytosol	8.77	46.15
Zm00001d043564_P001	Maize	cytosol	22.4	46.15
Zm00001d003637_P001	Maize	cytosol	4.71	46.03
Zm00001d036537_P007	Maize	cytosol	8.12	39.68
Zm00001d003638_P001	Maize	mitochondrion	8.93	39.01
VIT_12s0059g01220.t01	Wine grape	plastid	33.77	36.94
VIT_10s0116g00360.t01	Wine grape	cytosol, plastid	33.77	36.81
Zm00001d037466_P002	Maize	cytosol	6.17	31.67
Zm00001d013450_P001	Maize	cytosol, plastid	12.5	26.46

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	Gene3D:1.10.10.480
EntrezGene:100249662	wikigene:100249662	MapMan:2.1.1.1.2	Gene3D:3.40.50.450	Gene3D:3.40.50.460	ProteinID:CCB62683
ProteinID:CCB62683.1	UniProt:F6I6W5	EMBL:FN596759	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003872	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0046835	GO:GO:0046872	GO:GO:0047334	GO:GO:0061615	EntrezGene:LOC100249662
wikigene:LOC100249662	HAMAP:MF_01980	PFAM:PF00365	PIRSF:PIRSF005677	InterPro:PKF_sf	PANTHER:PTHR43650
PANTHER:PTHR43650:SF2	InterPro:PfpB_PPi_PFK	InterPro:Phosphofructokinase_dom	SUPFAM:SSF53784	TIGR:TC55890	TIGRFAMs:TIGR02477
UniParc:UPI00019851D4	ArrayExpress:VIT_18s0122g00510	EnsemblPlantsGene:VIT_18s0122g00510	EnsemblPlants:VIT_18s0122g00510.t01	unigene:Vvi.3322	RefSeq:XP_002276269
RefSeq:XP_002276269.1	SEG:seg	:	:	:	:

Description

Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [Source:UniProtKB/TrEMBL;Acc:F6I6W5]

Coordinates

chr18:+:425490..432899

Molecular Weight (calculated)

67348.2 Da

IEP (calculated)

7.799

GRAVY (calculated)

-0.119

Length

616 amino acids

Sequence
(BLAST)

001: MDSDFGIPRE LSDLQKHRCL YEPELPPCLQ GTTVRVEFGD ATTASDLSGA RTISRSFPHT YGQPLAHFLR ATAKVPDAQV ITEHPPIRVG VVFCGRQSPG
101: GHNVIWGLHN ALKIHNPKNI LLGFLGGSEG LFAQKTLEIT DDILSTYKNQ GGYDLLGRTK DQIRTTEQVN AALSTCKNLK LEGLVIIGGV TSNTDAAQLA
201: ETFAEAKCQT KVVGVPVSLN GDLKNQFVES NVGFDTICKV NSQLISNVCT DALSAEKYYY FIRLMGRKAS HVALECTLQS HPNMVILGEE VAASKLTLFD
301: LTKQICDAVQ ARAEQDKYHG VILLPEGLIE SIPEVYALLQ EIHGLLRQGV SAVNISSKLS PWASALFEFL PPFIKKQLLL YPESDDSAQL SQIETEKLLA
401: HLVEAEMNKR LKEGTYKGKK FNAICHFFGY QARGSLPSKF DCDYAYVLGH ICYHVLAAGL NGYMATVTNL KNPVNKWRCG AAPITAMMTV KRYSRGPGTS
501: SIGKPAVHPY ALDLKGKAYE LLSQNATKFL LDDLYRNPGP LQFDGPGADA KAVTLCVEDQ DYMGRIKKLQ QYLDKVRTIV KPGCSQDVLK AALSAMASVT
601: EILSVMTSPS SGQTPL

Best Arabidopsis Sequence Match ( AT1G76550.1 )
(BLAST)

001: MDSDFGIPRE LSPLQQLRSQ YHPELPPCLQ GTTVRVELGD GTTVAKAGDA HIIARAFPHT LGQPLAHFLR ATAKVADAQI ITEHPVKRVG IVFCGRQAPG
101: GHNVVWGLYE ALKVHNAKNT LLGFLGGSEG LFAQKTLEIT DEVLQTYKNQ GGYDMLGRTK DQIRTTEQVN AALKACTDLK LDSLVIIGGV TSNTDAAHLA
201: EFFAEAKCST KVVGVPVTIN GDLKNQFVEA NVGFDTTCKV NSQLISNICT DALSAEKYYY FVRLMGRKHS HVALECTLQS HPNMVILGEE VTASKLTIFD
301: IIKQICDAVQ ARAEQDKNHG VILIPEGLVE SIPELYALLK EIHGLLKEGV QVDNISTQLS SWSSALFEFL PPFIKKQLLL HPESDDSAQL SQIETEKLLA
401: YLVETEMNKR LKEGTYKGKK FNAICHFFGY QARGSLPSKF DCDYAYVLGH VCYHILAAGL NGYMATVTNL KSPVNKWKCG AAPISAMMTV KRWSQNSGST
501: TIGRPVIHPA SVDLKGKAYD LLRQNAQKFL MEDMYRNPGP VQYDGPGADA KAVSLCVEDQ DYMGKIKKLQ EYLDQVRTIV KPGCSQDVLK AALSVMASVT
601: DVLTTISSSS TSGQQFA

Arabidopsis Description

PFP-ALPHA2Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.