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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
 extracellular: 19786127
golgi: 23128297
golgi: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
msms PMID: 19786127 doi
FJ Kong, A Oyanagi, S Komatsu
National Institute of Crop Science, Tsukuba 305-8518, Japan.
msms, gfp PMID: 23128297 doi
M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G190800.1
TraesCS1A01G308700.1
TraesCS1A01G308800.1
TraesCS1B01G206000.1
TraesCS1B01G319300.1
TraesCS1D01G194800.2
TraesCS1D01G308000.1
TraesCS2B01G113800.2
TraesCS3A01G184500.1
TraesCS3A01G191900.1
TraesCS3A01G335000.1
TraesCS3B01G219900.1
TraesCS3B01G365900.1
TraesCS3D01G188600.1
TraesCS3D01G194500.2
TraesCS3D01G328300.1
TraesCS4B01G131100.1
TraesCS4D01G126100.1
TraesCS5A01G057100.1
TraesCS5A01G057200.1
TraesCS5A01G139700.1
TraesCS5A01G382800.2
TraesCS5B01G059900.1
TraesCS5B01G137100.1
TraesCS5D01G068000.1
TraesCS5D01G068100.1
TraesCS5D01G153400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G20950.1 TraesCS1A01G308700.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS1A01G308800.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS1B01G319300.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS1D01G308000.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS2B01G113800.2 AT2G41100.1 17360592
AT1G20950.1 TraesCS3A01G184500.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS3A01G191900.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS3A01G335000.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS3B01G219900.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS3B01G365900.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS3D01G188600.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS3D01G194500.2 AT2G41100.1 17360592
AT1G20950.1 TraesCS3D01G328300.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS4B01G131100.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS4D01G126100.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS5A01G057100.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS5A01G057200.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS5A01G139700.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS5B01G059900.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS5B01G137100.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS5D01G068000.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS5D01G068100.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS5D01G153400.1 AT2G41100.1 17360592
AT1G20950.1 TraesCS5A01G382800.2 AT4G14640.1 17360592
AT1G20950.1 TraesCS1A01G190800.1 AT5G65940.1 21798944
AT1G20950.1 TraesCS1B01G206000.1 AT5G65940.1 21798944
AT1G20950.1 TraesCS1D01G194800.2 AT5G65940.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G279100.2 Wheat cytosol 94.32 100.0
TraesCS6B01G307200.1 Wheat cytosol 99.68 99.68
HORVU6Hr1G070270.5 Barley cytosol 99.51 94.02
EES05627 Sorghum cytosol 93.51 93.51
Os02t0714200-01 Rice cytosol, plasma membrane 93.51 93.35
Zm00001d017830_P001 Maize cytosol 93.02 92.72
Zm00001d051629_P003 Maize cytosol 87.82 86.7
TraesCS7D01G228500.1 Wheat cytosol 82.95 83.63
GSMUA_Achr7P20550_001 Banana cytosol 82.95 83.36
PGSC0003DMT400075360 Potato cytosol 81.82 81.69
Solyc12g095760.1.1 Tomato cytosol, extracellular, nucleus, unclear 81.82 81.69
GSMUA_Achr9P12330_001 Banana cytosol 80.84 80.84
VIT_18s0122g00510.t01 Wine grape cytosol 80.52 80.52
Solyc04g082880.2.1 Tomato cytosol, nucleus, plastid, unclear 80.36 80.36
KRH49514 Soybean cytosol, endoplasmic reticulum, nucleus 80.36 80.23
PGSC0003DMT400025919 Potato cytosol 80.19 80.19
KRG89187 Soybean endoplasmic reticulum 79.38 79.25
AT1G76550.1 Thale cress cytosol 78.9 78.77
AT1G20950.1 Thale cress cytosol 77.44 77.69
CDX87587 Canola cytosol 77.76 77.63
Bra015734.1-P Field mustard cytosol 77.6 77.47
CDY67203 Canola cytosol 77.76 77.38
CDY67022 Canola cytosol 77.76 77.38
Bra025858.1-P Field mustard cytosol 77.76 77.38
CDX88295 Canola cytosol 77.44 77.31
CDY33660 Canola cytosol 74.68 76.92
CDX96611 Canola cytosol 74.51 76.76
TraesCS5D01G085500.2 Wheat golgi 66.07 61.3
Zm00001d035883_P001 Maize mitochondrion 9.25 59.38
Zm00001d004479_P001 Maize mitochondrion 18.51 58.76
Zm00001d015529_P001 Maize mitochondrion 16.56 56.35
Zm00001d021503_P001 Maize cytosol 25.97 55.56
Zm00001d008809_P001 Maize cytosol 20.94 54.43
TraesCS7D01G200800.1 Wheat plastid 33.44 36.79
Zm00001d037466_P002 Maize cytosol 6.33 32.5
Zm00001d013450_P001 Maize cytosol, plastid 13.8 29.21
Protein Annotations
KEGG:00010+2.7.1.11KEGG:00030+2.7.1.11KEGG:00051+2.7.1.11KEGG:00052+2.7.1.11KEGG:00680+2.7.1.11Gene3D:1.10.10.480
MapMan:2.1.1.1.2Gene3D:3.40.50.450Gene3D:3.40.50.460InterPro:ATP_PFKGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0003872GO:GO:0005488GO:GO:0005524GO:GO:0005975GO:GO:0006002
GO:GO:0006091GO:GO:0006096GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009058GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0047334HAMAP:MF_01980
PFAM:PF00365PIRSF:PIRSF005677InterPro:PKF_sfPRINTS:PR00476PANTHER:PTHR43650PANTHER:PTHR43650:SF3
InterPro:PfpB_PPi_PFKInterPro:Phosphofructokinase_domSUPFAM:SSF53784TIGRFAMs:TIGR02477EnsemblPlantsGene:TraesCS6D01G259500EnsemblPlants:TraesCS6D01G259500.1
Description
No Description!
Coordinates
chr6D:-:365727215..365732952
Molecular Weight (calculated)
67147.9 Da
IEP (calculated)
7.188
GRAVY (calculated)
-0.136
Length
616 amino acids
Sequence
(BLAST)
001: MDSDYGVPRE LSEVQQNRTL YQPELPPCLQ GTTVRVEYGD VAIAADPAGA HVISHAYPHT YGQPLAHFLR KAANVPDAKV ISEHPAVRVG IVFCGRQSPG
101: GHNVIWGLHE AIKAHNVNSK LIGFLGGTDG LLAQKTLEIT NEVLSSYKNQ GGYDMLGRTK DQIRTTEQVN GAMATCQALK LDALVIIGGV TSNTDAAQLA
201: ETFAEAKCAT KVVGVPVTLN GDLKNQFVET TVGFDTICKV NSQLISNMCT DALSAEKYYY FIRMMGRKAS HVALECALQS HPNMVILGEE VAASKLTIFD
301: ITKQICDAVQ ARAEKDKNHG VILIPEGLVE SIPELYALLQ EINGLHGKGV SVENISSQLS PWASALFEFL PQFIRQQLLL RPESDDSAQL SQIETEKLLA
401: QLVETEMNKR LKEGTYKGKK FNAICHFFGY QARGAMPSKF DCDYAYVLGH VCYHILAAGL NGYMATVTNL KSPLNKWRCG AAPISSMMTV KRWSRGPATT
501: QIGKPAVHMA SVDLRGKAYE MLRQNSSSCL LEDIYRNPGP LQFEGPGADA KPISLCVEDQ DYMGRIKKLQ EYLEKVKSIV KPGCSQDVLK AALSAMSSVT
601: ETLAIMTSSS TGQPPL
Best Arabidopsis Sequence Match ( AT1G76550.1 )
(BLAST)
001: MDSDFGIPRE LSPLQQLRSQ YHPELPPCLQ GTTVRVELGD GTTVAKAGDA HIIARAFPHT LGQPLAHFLR ATAKVADAQI ITEHPVKRVG IVFCGRQAPG
101: GHNVVWGLYE ALKVHNAKNT LLGFLGGSEG LFAQKTLEIT DEVLQTYKNQ GGYDMLGRTK DQIRTTEQVN AALKACTDLK LDSLVIIGGV TSNTDAAHLA
201: EFFAEAKCST KVVGVPVTIN GDLKNQFVEA NVGFDTTCKV NSQLISNICT DALSAEKYYY FVRLMGRKHS HVALECTLQS HPNMVILGEE VTASKLTIFD
301: IIKQICDAVQ ARAEQDKNHG VILIPEGLVE SIPELYALLK EIHGLLKEGV QVDNISTQLS SWSSALFEFL PPFIKKQLLL HPESDDSAQL SQIETEKLLA
401: YLVETEMNKR LKEGTYKGKK FNAICHFFGY QARGSLPSKF DCDYAYVLGH VCYHILAAGL NGYMATVTNL KSPVNKWKCG AAPISAMMTV KRWSQNSGST
501: TIGRPVIHPA SVDLKGKAYD LLRQNAQKFL MEDMYRNPGP VQYDGPGADA KAVSLCVEDQ DYMGKIKKLQ EYLDQVRTIV KPGCSQDVLK AALSVMASVT
601: DVLTTISSSS TSGQQFA
Arabidopsis Description
PFP-ALPHA2Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.