Factsheet for PGSC0003DMT400025919

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400000043
PGSC0003DMT400000054
PGSC0003DMT400004521
PGSC0003DMT400004567
PGSC0003DMT400004585
PGSC0003DMT400014123
PGSC0003DMT400018569
PGSC0003DMT400034833
PGSC0003DMT400042062
PGSC0003DMT400046278
PGSC0003DMT400054299
PGSC0003DMT400058435
PGSC0003DMT400066409
PGSC0003DMT400066411
PGSC0003DMT400066414
PGSC0003DMT400066419
PGSC0003DMT400066424
PGSC0003DMT400070437
PGSC0003DMT400097662

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G20950.1	PGSC0003DMT400014123	AT2G41100.1	17360592
AT1G20950.1	PGSC0003DMT400018569	AT2G41100.1	17360592
AT1G20950.1	PGSC0003DMT400046278	AT2G41100.1	17360592
AT1G20950.1	PGSC0003DMT400054299	AT2G41100.1	17360592
AT1G20950.1	PGSC0003DMT400058435	AT2G41100.1	17360592
AT1G20950.1	PGSC0003DMT400070437	AT2G41100.1	17360592
AT1G20950.1	PGSC0003DMT400097662	AT2G41100.1	17360592
AT1G20950.1	PGSC0003DMT400034833	AT4G14640.1	17360592
AT1G20950.1	PGSC0003DMT400042062	AT4G14640.1	17360592
AT1G20950.1	PGSC0003DMT400000043	AT5G65940.1	21798944
AT1G20950.1	PGSC0003DMT400000054	AT5G65940.1	21798944
AT1G20950.1	PGSC0003DMT400004521	AT5G65940.1	21798944
AT1G20950.1	PGSC0003DMT400004567	AT5G65940.1	21798944
AT1G20950.1	PGSC0003DMT400004585	AT5G65940.1	21798944
AT1G20950.1	PGSC0003DMT400066409	AT5G65940.1	21798944
AT1G20950.1	PGSC0003DMT400066411	AT5G65940.1	21798944
AT1G20950.1	PGSC0003DMT400066414	AT5G65940.1	21798944
AT1G20950.1	PGSC0003DMT400066419	AT5G65940.1	21798944
AT1G20950.1	PGSC0003DMT400066424	AT5G65940.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g082880.2.1	Tomato	cytosol, nucleus, plastid, unclear	98.86	98.86
PGSC0003DMT400075360	Potato	cytosol	91.07	90.92
VIT_18s0122g00510.t01	Wine grape	cytosol	87.99	87.99
AT1G20950.1	Thale cress	cytosol	83.12	83.39
KRH49514	Soybean	cytosol, endoplasmic reticulum, nucleus	83.44	83.31
AT1G76550.1	Thale cress	cytosol	83.12	82.98
CDX87587	Canola	cytosol	83.12	82.98
Bra015734.1-P	Field mustard	cytosol	83.12	82.98
CDY67022	Canola	cytosol	83.28	82.88
CDY67203	Canola	cytosol	83.28	82.88
Bra025858.1-P	Field mustard	cytosol	83.28	82.88
KRG89187	Soybean	endoplasmic reticulum	82.95	82.82
CDX88295	Canola	cytosol	82.79	82.66
CDX96611	Canola	cytosol	80.03	82.44
CDY33660	Canola	cytosol	80.03	82.44
Os02t0714200-01	Rice	cytosol, plasma membrane	81.66	81.52
EES05627	Sorghum	cytosol	81.01	81.01
Zm00001d017830_P001	Maize	cytosol	80.84	80.58
TraesCS6D01G259500.1	Wheat	golgi	80.19	80.19
TraesCS6B01G307200.1	Wheat	cytosol	80.03	80.03
TraesCS6A01G279100.2	Wheat	cytosol	74.84	79.35
Os06t0326400-01	Rice	cytosol, plasma membrane, plastid	80.03	79.26
OQU76351	Sorghum	cytosol	78.57	77.94
TraesCS7B01G193600.1	Wheat	cytosol	75.97	76.6
TraesCS7A01G226000.2	Wheat	cytosol	75.97	76.6
TraesCS7D01G228500.1	Wheat	cytosol	75.81	76.43
HORVU6Hr1G070270.5	Barley	cytosol	80.36	75.92
Zm00001d051629_P003	Maize	cytosol	75.0	74.04
Zm00001d045919_P001	Maize	mitochondrion	56.82	73.53
HORVU7Hr1G047000.11	Barley	cytosol	75.81	70.02
TraesCS5A01G072700.2	Wheat	cytosol, golgi	66.56	66.02
HORVU5Hr1G019030.9	Barley	cytosol	66.23	65.59
Zm00001d032386_P003	Maize	cytosol	65.58	65.37
Os09t0298100-00	Rice	plastid	65.26	64.84
KXG34347	Sorghum	cytosol	64.94	64.72
Os08t0345700-01	Rice	extracellular	64.77	64.67
KXG35340	Sorghum	cytosol	65.58	64.03
GSMUA_AchrUn_...	Banana	cytosol	13.64	62.22
OQU80257	Sorghum	cytosol	54.06	62.13
Zm00001d020006_P001	Maize	cytosol	54.55	61.76
TraesCS5D01G085500.2	Wheat	golgi	66.4	61.6
TraesCS5B01G078300.1	Wheat	golgi	66.4	61.6
Zm00001d035883_P001	Maize	mitochondrion	9.09	58.33
Zm00001d004479_P001	Maize	mitochondrion	17.21	54.64
Zm00001d008809_P001	Maize	cytosol	19.64	51.05
GSMUA_AchrUn_...	Banana	cytosol	8.28	51.0
Zm00001d021503_P001	Maize	cytosol	23.54	50.35
Zm00001d015529_P001	Maize	mitochondrion	13.96	47.51
Zm00001d003637_P001	Maize	cytosol	4.71	46.03
Zm00001d043564_P001	Maize	cytosol	21.92	45.15
Zm00001d032792_P001	Maize	cytosol	8.44	44.44
Zm00001d003638_P001	Maize	mitochondrion	9.09	39.72
Zm00001d036537_P007	Maize	cytosol	8.12	39.68
PGSC0003DMT400001785	Potato	plastid	33.77	37.55
PGSC0003DMT400043111	Potato	plastid	33.6	36.38
Zm00001d037466_P002	Maize	cytosol	6.33	32.5
Zm00001d013450_P001	Maize	cytosol, plastid	12.34	26.12

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	Gene3D:1.10.10.480
EntrezGene:102577617	MapMan:2.1.1.1.2	Gene3D:3.40.50.450	Gene3D:3.40.50.460	ProteinID:AAA63451	ProteinID:AAA63451.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003872	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006091
GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0046835	GO:GO:0046872
GO:GO:0047334	GO:GO:0061615	EMBL:M55190	HAMAP:MF_01980	RefSeq:NP_001275358.1	UniProt:P21342
PFAM:PF00365	EnsemblPlantsGene:PGSC0003DMG400010007	PGSC:PGSC0003DMG400010007	EnsemblPlants:PGSC0003DMT400025919	PIRSF:PIRSF005677	InterPro:PKF_sf
PANTHER:PTHR43650	PANTHER:PTHR43650:SF2	InterPro:PfpB_PPi_PFK	InterPro:Phosphofructokinase_dom	SUPFAM:SSF53784	TIGRFAMs:TIGR02477
UniParc:UPI000296CD13	SEG:seg	:	:	:	:

Description

PFP-ALPHAPyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P21342]

Coordinates

chr4:-:72021869..72027890

Molecular Weight (calculated)

67363.1 Da

IEP (calculated)

7.459

GRAVY (calculated)

-0.115

Length

616 amino acids

Sequence
(BLAST)

001: MDADYGIPRE LSDLQKLRSH YHPELPPCLQ GTTVRVELRD ATTAADPSGE HTIKRFFPHT YGQPLAHFLR ATAKVPDAQI ITEHPAIRVG VLFCGRQSPG
101: GHNVIWGLHD ALKVHNPKNI LLGFLGGSEG LFAQKTLEIT DDVLATYKNQ GGYDMLGRTK DQIRTTEQVN AAMAACKALK LDGLVIIGGV TSNTDAAHLA
201: EKFAETKCLT KVVGVPVTLN GDLKNQFVEA NVGFDTICKV NSQLISNVCT DALSAEKYYY FIRLMGRKAS HVALECTLQS HPNMVILGEE VAASKLTIFD
301: ITQQICDAVQ ARAEHDKNHG VILLPEGLIE SIPEVYALLQ EIHGLLRQGV SADKISSQLS PWASALFEFL PHFIRKQLLL HPESDDSAQL SQIETEKLIA
401: HLVETEMNKR LKEGTYKGKK FNAICHFFGY QARGSLPSKF DCDYAYVLGH VCYHILAAGL NGYMATITNL KNPANKWHCG ASPISAMMTV KRYGRGPGKA
501: SIGVPALHPA TVDLRGKSYE LLSQNATKFL LDDVYRNPGP LQFDGPGADA KAVSLCVEDQ DYIGRIKKLQ EYLDKVRTIV KPGCSQDVLK AALSAMASVT
601: DILSVISSPS SVSTPF

Best Arabidopsis Sequence Match ( AT1G76550.1 )
(BLAST)

001: MDSDFGIPRE LSPLQQLRSQ YHPELPPCLQ GTTVRVELGD GTTVAKAGDA HIIARAFPHT LGQPLAHFLR ATAKVADAQI ITEHPVKRVG IVFCGRQAPG
101: GHNVVWGLYE ALKVHNAKNT LLGFLGGSEG LFAQKTLEIT DEVLQTYKNQ GGYDMLGRTK DQIRTTEQVN AALKACTDLK LDSLVIIGGV TSNTDAAHLA
201: EFFAEAKCST KVVGVPVTIN GDLKNQFVEA NVGFDTTCKV NSQLISNICT DALSAEKYYY FVRLMGRKHS HVALECTLQS HPNMVILGEE VTASKLTIFD
301: IIKQICDAVQ ARAEQDKNHG VILIPEGLVE SIPELYALLK EIHGLLKEGV QVDNISTQLS SWSSALFEFL PPFIKKQLLL HPESDDSAQL SQIETEKLLA
401: YLVETEMNKR LKEGTYKGKK FNAICHFFGY QARGSLPSKF DCDYAYVLGH VCYHILAAGL NGYMATVTNL KSPVNKWKCG AAPISAMMTV KRWSQNSGST
501: TIGRPVIHPA SVDLKGKAYD LLRQNAQKFL MEDMYRNPGP VQYDGPGADA KAVSLCVEDQ DYMGKIKKLQ EYLDQVRTIV KPGCSQDVLK AALSVMASVT
601: DVLTTISSSS TSGQQFA

Arabidopsis Description

PFP-ALPHA2Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.