CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91893
EES01631
EES09201
EES16322
KXG29172
KXG37587
KXG37588
OQU78227
OQU84058

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G20950.1	EES01631	AT2G41100.1	17360592
AT1G20950.1	EES09201	AT2G41100.1	17360592
AT1G20950.1	EES16322	AT2G41100.1	17360592
AT1G20950.1	OQU78227	AT2G41100.1	17360592
AT1G20950.1	KXG37587	AT4G14640.1	17360592
AT1G20950.1	KXG37588	AT4G14640.1	17360592
AT1G20950.1	EER91893	AT5G65940.1	21798944
AT1G20950.1	KXG29172	AT5G65940.1	21798944
AT1G20950.1	OQU84058	AT5G65940.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020006_P001	Maize	cytosol	78.76	91.36
OQU89184	Sorghum	cytosol	17.12	87.1
Os09t0298100-00	Rice	plastid	78.29	79.68
KXG34347	Sorghum	cytosol	76.7	78.32
OQU80257	Sorghum	cytosol	63.71	75.0
GSMUA_Achr3P11650_001	Banana	cytosol	66.4	67.8
GSMUA_Achr1P06200_001	Banana	cytosol	65.77	67.26
KRH49514	Soybean	cytosol, endoplasmic reticulum, nucleus	65.61	67.1
VIT_18s0122g00510.t01	Wine grape	cytosol	65.29	66.88
KRG89187	Soybean	endoplasmic reticulum	65.13	66.61
Solyc12g095760.1.1	Tomato	cytosol, extracellular, nucleus, unclear	64.82	66.29
PGSC0003DMT400075360	Potato	cytosol	64.82	66.29
Solyc04g082880.2.1	Tomato	cytosol, nucleus, plastid, unclear	64.03	65.58
PGSC0003DMT400025919	Potato	cytosol	64.03	65.58
EES05627	Sorghum	cytosol	62.92	64.45
CDX88295	Canola	cytosol	62.76	64.18
Bra015734.1-P	Field mustard	cytosol	62.76	64.18
CDX87587	Canola	cytosol	62.44	63.86
OQU76351	Sorghum	cytosol	62.6	63.61
AT1G76550.1	Thale cress	cytosol	61.81	63.21
CDY33660	Canola	cytosol	59.59	62.88
CDX96611	Canola	cytosol	59.59	62.88
Bra025858.1-P	Field mustard	cytosol	61.65	62.84
CDY67203	Canola	cytosol	61.65	62.84
CDY67022	Canola	cytosol	61.49	62.68
AT1G20950.1	Thale cress	cytosol	60.38	62.05
EER89514	Sorghum	plastid	33.6	37.52

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	Gene3D:1.10.10.480
MapMan:2.1.1.1.2	Gene3D:3.40.50.450	Gene3D:3.40.50.460	EntrezGene:8071861	UniProt:A0A1B6QBQ9	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003872	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0046835	GO:GO:0046872	GO:GO:0047334
GO:GO:0061615	EnsemblPlants:KXG35340	ProteinID:KXG35340	ProteinID:KXG35340.1	HAMAP:MF_01980	PFAM:PF00365
InterPro:PKF_sf	PANTHER:PTHR43650	PANTHER:PTHR43650:SF4	MetaCyc:PWY-1042	MetaCyc:PWY-1861	MetaCyc:PWY-5484
MetaCyc:PWY-7385	InterPro:PfpB_PPi_PFK	InterPro:Phosphofructokinase_dom	EnsemblPlantsGene:SORBI_3002G160300	SUPFAM:SSF53784	unigene:Sbi.7667
TIGRFAMs:TIGR02477	UniParc:UPI00081AC626	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:49522558..49529937

Molecular Weight (calculated)

69119.1 Da

IEP (calculated)

6.366

GRAVY (calculated)

-0.067

Length

631 amino acids

Sequence
(BLAST)

001: MNADDLGSPR ELTGLQRRRA LYQPELPPCL VQVYDMMGTR IRVEFGDSTT TIDSKCADIV AQAFPHIFGQ KLVRFLEPHM DTVVSESDAQ VIQENSPIRV
101: GVVFSGRQSP GGHNVIWGTY DALKAQNPHN VLLGFIGGTE GLFAKKTLEI TDDVLSSYKN QGGFDLLGRT VDQIRTTEQI NAAKATCCDL NLDGLIIIGG
201: VTSNSDAAQL AEIFAEHNCK TKVIGVPVTL SGDLRNQFVE TTVGFDTVCK VNSQLISNVC LDAISAGKYY YFVRLMGGKA SHVALECALQ SHPNMVILGE
301: EVAFSKLTLK EITNKICDGV EARAEQGKHH GVLVIPEGLI ESIPEMYALI QEINNLHSNN ISEADIPSQL SPWAAALFKF LPSFIRRELI LHQESDNSAQ
401: LSQIDTEQLL AHLVEAEMNK RTKEGKYKGR KFSSVCHFFG SQARGSLPSN FDCNYAYVLG HICVQIIAAG LNGYMATVTN LKDSTNKWRC AAVPLAAMMS
501: VRRHLRGPGA VPIGKPVIHP SPIDLKAESY AVLREKASSF LLDDFYRTPG GIQFEGPGAG TKPITLTIEE QDYLGDIEIL QAYLDKVRTI LKPGCSREIL
601: KASISSIASV NDVLKFMSAP LNTELPLYHF N

Best Arabidopsis Sequence Match ( AT1G76550.1 )
(BLAST)

001: MDSDFGIPRE LSPLQQLRSQ YHPELPPCLQ GTTVRVELGD GTTVAKAGDA HIIARAFPHT LGQPLAHFLR ATAKVADAQI ITEHPVKRVG IVFCGRQAPG
101: GHNVVWGLYE ALKVHNAKNT LLGFLGGSEG LFAQKTLEIT DEVLQTYKNQ GGYDMLGRTK DQIRTTEQVN AALKACTDLK LDSLVIIGGV TSNTDAAHLA
201: EFFAEAKCST KVVGVPVTIN GDLKNQFVEA NVGFDTTCKV NSQLISNICT DALSAEKYYY FVRLMGRKHS HVALECTLQS HPNMVILGEE VTASKLTIFD
301: IIKQICDAVQ ARAEQDKNHG VILIPEGLVE SIPELYALLK EIHGLLKEGV QVDNISTQLS SWSSALFEFL PPFIKKQLLL HPESDDSAQL SQIETEKLLA
401: YLVETEMNKR LKEGTYKGKK FNAICHFFGY QARGSLPSKF DCDYAYVLGH VCYHILAAGL NGYMATVTNL KSPVNKWKCG AAPISAMMTV KRWSQNSGST
501: TIGRPVIHPA SVDLKGKAYD LLRQNAQKFL MEDMYRNPGP VQYDGPGADA KAVSLCVEDQ DYMGKIKKLQ EYLDQVRTIV KPGCSQDVLK AALSVMASVT
601: DVLTTISSSS TSGQQFA

Arabidopsis Description

PFP-ALPHA2Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.