CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35340	Sorghum	cytosol	87.1	17.12
KXG34347	Sorghum	cytosol	53.23	10.68
KRH71808	Soybean	cytosol	15.32	10.38
EES05627	Sorghum	cytosol	45.16	9.09
OQU76351	Sorghum	cytosol	43.55	8.7
KRH71798	Soybean	cytosol	5.65	6.54
EER89514	Sorghum	plastid	23.39	5.13
KRH11497	Soybean	nucleus	21.77	4.8
KRH36515	Soybean	endoplasmic reticulum, mitochondrion	20.97	4.63
GSMUA_Achr8P22590_001	Banana	cytosol, plastid	20.97	4.61
Bra019733.1-P	Field mustard	plastid	20.97	4.59
AT1G12000.1	Thale cress	plastid	20.16	4.42
KRH51142	Soybean	endoplasmic reticulum, nucleus	20.16	4.4
Bra029482.1-P	Field mustard	cytosol	20.16	4.4
GSMUA_Achr3P08040_001	Banana	cytosol, mitochondrion	20.97	4.27
GSMUA_Achr7P02210_001	Banana	plastid	19.35	4.26
KRH02012	Soybean	endoplasmic reticulum, plastid	19.35	4.17
PGSC0003DMT400043111	Potato	plastid	18.55	4.04
Solyc02g081160.2.1	Tomato	plastid	18.55	4.04
AT4G04040.1	Thale cress	cytosol	18.55	4.04
VIT_10s0116g00360.t01	Wine grape	cytosol, plastid	17.74	3.89
CDY31232	Canola	cytosol, plastid	8.06	3.01
Bra016799.1-P	Field mustard	cytosol	7.26	2.65
OQU80257	Sorghum	cytosol	4.03	0.93
CDY21025	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:OQU89184	EnsemblPlantsGene:SORBI_3002G156750	Gene3D:3.40.50.450	PANTHER:PTHR43650	PANTHER:PTHR43650:SF4	ProteinID:OQU89184
ProteinID:OQU89184.1	UniParc:UPI0009DC9107	UniProt:A0A1W0W449	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr2:-:47643076..47645549

Molecular Weight (calculated)

13837.6 Da

IEP (calculated)

6.782

GRAVY (calculated)

-0.294

Length

124 amino acids

Sequence
(BLAST)

001: MNADDLGSPR ELTGLQRRRA LYQPELPPCL VQGTRIRVEF GDSTTTIDSK CADIVAQAFP HIFGQKLVRF LEPHMDTVVS ESDAQVIQEN SPIRVGVVFS
101: GRQDRLWKLY LGRSSLMDPH VTGG

Best Arabidopsis Sequence Match ( AT1G76550.1 )
(BLAST)

001: MDSDFGIPRE LSPLQQLRSQ YHPELPPCLQ GTTVRVELGD GTTVAKAGDA HIIARAFPHT LGQPLAHFLR ATAKVADAQI ITEHPVKRVG IVFCGRQAPG
101: GHNVVWGLYE ALKVHNAKNT LLGFLGGSEG LFAQKTLEIT DEVLQTYKNQ GGYDMLGRTK DQIRTTEQVN AALKACTDLK LDSLVIIGGV TSNTDAAHLA
201: EFFAEAKCST KVVGVPVTIN GDLKNQFVEA NVGFDTTCKV NSQLISNICT DALSAEKYYY FVRLMGRKHS HVALECTLQS HPNMVILGEE VTASKLTIFD
301: IIKQICDAVQ ARAEQDKNHG VILIPEGLVE SIPELYALLK EIHGLLKEGV QVDNISTQLS SWSSALFEFL PPFIKKQLLL HPESDDSAQL SQIETEKLLA
401: YLVETEMNKR LKEGTYKGKK FNAICHFFGY QARGSLPSKF DCDYAYVLGH VCYHILAAGL NGYMATVTNL KSPVNKWKCG AAPISAMMTV KRWSQNSGST
501: TIGRPVIHPA SVDLKGKAYD LLRQNAQKFL MEDMYRNPGP VQYDGPGADA KAVSLCVEDQ DYMGKIKKLQ EYLDQVRTIV KPGCSQDVLK AALSVMASVT
601: DVLTTISSSS TSGQQFA

Arabidopsis Description

PFP-ALPHA2Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.