Factsheet for Solyc02g081160.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 1
cytosol 3

Predictors

GFP

MS/MS

Papers

plastid: 20363867
extracellular: 22364583
plastid: 22908117
nucleus: 25464976
plastid: 26371478
unclear: 26455813
extracellular: 29876421

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

msms PMID: 26455813 doi

P Paul, P Chaturvedi, M Selymesi, A Ghatak, A Mesihovic, KD Scharf, W Weckwerth, S Simm, E Schleiff

Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400043111	Potato	plastid	99.3	99.3
VIT_10s0116g00360.t01	Wine grape	cytosol, plastid	81.2	81.77
GSMUA_Achr8P22590_001	Banana	cytosol, plastid	80.67	81.38
CDY34604	Canola	cytosol	72.06	80.87
Solyc07g049280.2.1	Tomato	nucleus, unclear	78.73	80.87
GSMUA_Achr7P02210_001	Banana	plastid	80.14	80.85
Os06t0247500-01	Rice	plastid	79.61	79.89
Zm00001d037278_P001	Maize	plastid	79.09	79.79
CDY30046	Canola	plastid	79.26	79.68
CDX98086	Canola	plastid	79.09	79.51
TraesCS7D01G200800.1	Wheat	plastid	78.21	79.46
TraesCS7A01G198200.2	Wheat	golgi, plastid	78.21	79.46
Bra019733.1-P	Field mustard	plastid	78.91	79.33
TraesCS7B01G104400.1	Wheat	plastid	78.03	79.29
AT1G12000.1	Thale cress	plastid	78.38	78.8
Zm00001d044754_P001	Maize	extracellular, plastid	78.73	77.24
Solyc04g026340.1.1	Tomato	cytosol	13.01	76.29
GSMUA_Achr3P08040_001	Banana	cytosol, mitochondrion	80.32	75.04
HORVU7Hr1G040550.9	Barley	cytosol, peroxisome, plastid	76.8	65.62
Bra016799.1-P	Field mustard	cytosol	38.66	64.71
KRH71808	Soybean	cytosol	18.45	57.38
Solyc12g095760.1.1	Tomato	cytosol, extracellular, nucleus, unclear	37.26	34.36
Solyc04g082880.2.1	Tomato	cytosol, nucleus, plastid, unclear	36.2	33.44
OQU89184	Sorghum	cytosol	4.04	18.55

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	Gene3D:1.10.10.480
MapMan:2.1.1.1.2	Gene3D:3.40.50.450	Gene3D:3.40.50.460	InterPro:ATP_PFK	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003872	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006002	GO:GO:0006091	GO:GO:0006096
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0046835	GO:GO:0046872	GO:GO:0047334
GO:GO:0061615	UniProt:K4B9Y6	HAMAP:MF_01980	PFAM:PF00365	PIRSF:PIRSF005677	InterPro:PKF_sf
PRINTS:PR00476	PANTHER:PTHR43650	PANTHER:PTHR43650:SF6	InterPro:PfpB_PPi_PFK	InterPro:Phosphofructokinase_dom	SUPFAM:SSF53784
EnsemblPlantsGene:Solyc02g081160.2	EnsemblPlants:Solyc02g081160.2.1	TIGRFAMs:TIGR02477	UniParc:UPI00027675C2	SEG:seg	:

Description

Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta [Source:UniProtKB/TrEMBL;Acc:K4B9Y6]

Coordinates

chr2:-:45224671..45231348

Molecular Weight (calculated)

61769.4 Da

IEP (calculated)

6.383

GRAVY (calculated)

-0.134

Length

569 amino acids

Sequence
(BLAST)

001: MAAAALSLLN NGELASSVKS PGTGRYAAVY SEVQNSRLDH PLPLPSVLGS PFKVVDGPPS SAAGHPEEIA KLFPSLYGQP SVSLVPDDSG DVAMNQILKI
101: GVVLSGGQAP GGHNVISGIF DYLQTHCKGS TMYGFRGGPA GVMKGKYVGL TPEFIYPYRN QGGFDMICSG RDKIETPEQF KQAEETAKKL DLDGLVVIGG
201: DDSNTNACLL AENFRSKNLK TRVIGCPKTI DGDLKSKEVP TSFGFDTACK IYAEMIGNVM VDARSTGKYY HFVRLMGRAA SHITLECALQ THPNVTLIGE
301: EVFAKKLTLK NVTDYIADVV CKRAESGYNY GVILIPEGLI DFIPEVQQLI AELNEILAHD VVDEAGVWKK KLTPQCLELF ELLPLAIQEQ LLLERDPHGN
401: VQVAKIETEK MLIQMVETEL DQRKQKGAYN AQFKGQSHFF GYEGRCGLPS NFDSTYCYAL GYGAGSLLQS GKTGLISSVG NLAAPVEEWT VGGTALTALM
501: DVERRHGKFK PVIKKAMVEL EGAPFKKFAS KREEWALNNR YINPGPIQFV GPVANKVNHT LLLELGVDA

Best Arabidopsis Sequence Match ( AT4G04040.1 )
(BLAST)

001: MASQLDLIGG DYIAGISINP PTNSRVTSVY SEVQASRIDH TLPLPSVFKT PFKIIDGPPS SSAGHPEEIE KLFPNLFGQP SALLVPNQSN EVSSDQKLKI
101: GVVLSGGQAP GGHNVICGIF DYLQEYARGS SLFGFRGGPA GIMKGKYIEL TSEFVYPYRN QGGFDMICSG RDKIETPEQF KQAEETVTKM DLDGLVVIGG
201: DDSNTNACLL AEHFRAKNMK TLVIGCPKTI DGDLKSKEVP TSFGFDTACK IYSEMIGNVM IDARSTGKYY HFVRLMGRAA SHITLECALQ THPNITIIGE
301: EVFEKKLTLK NVTDNIVDVI YKRAENGYNY GVILVPEGLI DFIPEVQQLI SELNEVLAEG NVDEEGQWKK NLKKETLEIF EFLPQTIQEQ LMLERDPHGN
401: VQVAKIETEK MLIQMVETEL EKKKTEGTYE REFMGKSHFF GYEGRCGLPT NFDATYCYAL GYGAGSLLQS GKTGLISSVG NLAAPVEEWT VGGTALTSLM
501: DVERRHGKFK PVIKKAMVEL EGAPFKKFAS QREEWALKNR YISPGPIQFK GPGSDARNHT LMLELGAQA

Arabidopsis Description

PFP-BETA2Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 2 [Source:UniProtKB/Swiss-Prot;Acc:F4JGR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.