Factsheet for Os06t0247500-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
extracellular 1
plastid 6

Predictors

GFP

MS/MS

Papers

extracellular: 24083427
plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d037278_P001	Maize	plastid	88.54	89.01
EER89514	Sorghum	plastid	88.18	88.5
TraesCS7D01G200800.1	Wheat	plastid	86.6	87.68
TraesCS7A01G198200.2	Wheat	golgi, plastid	86.6	87.68
TraesCS7B01G104400.1	Wheat	plastid	86.42	87.5
Zm00001d044754_P001	Maize	extracellular, plastid	88.71	86.72
KRH71798	Soybean	cytosol	15.52	82.24
GSMUA_Achr8P22590_001	Banana	cytosol, plastid	81.48	81.91
VIT_10s0116g00360.t01	Wine grape	cytosol, plastid	80.95	81.24
GSMUA_Achr7P02210_001	Banana	plastid	80.6	81.03
KRH51142	Soybean	endoplasmic reticulum, nucleus	80.78	80.63
KRH11497	Soybean	nucleus	79.89	80.61
Solyc07g049280.2.1	Tomato	nucleus, unclear	78.66	80.51
PGSC0003DMT400001785	Potato	plastid	78.31	80.14
KRH36515	Soybean	endoplasmic reticulum, mitochondrion	79.37	80.07
VIT_12s0059g01220.t01	Wine grape	plastid	79.19	79.75
Solyc02g081160.2.1	Tomato	plastid	79.89	79.61
PGSC0003DMT400043111	Potato	plastid	79.54	79.26
Bra029482.1-P	Field mustard	cytosol	79.37	79.23
CDY34604	Canola	cytosol	70.02	78.3
AT4G04040.1	Thale cress	cytosol	78.13	77.86
KRH02012	Soybean	endoplasmic reticulum, plastid	77.95	76.87
CDY30046	Canola	plastid	76.37	76.5
GSMUA_Achr3P08040_001	Banana	cytosol, mitochondrion	82.01	76.35
CDX98086	Canola	plastid	76.19	76.33
Bra019733.1-P	Field mustard	plastid	76.01	76.15
AT1G12000.1	Thale cress	plastid	75.66	75.8
HORVU7Hr1G040550.9	Barley	cytosol, peroxisome, plastid	83.77	71.32
CDX94541	Canola	cytosol	79.37	70.98
CDY21025	Canola	cytosol	11.11	66.32
CDY31232	Canola	cytosol, plastid	38.62	65.96
Bra016799.1-P	Field mustard	cytosol	38.1	63.53
KRH71808	Soybean	cytosol	18.69	57.92
Os08t0345700-01	Rice	extracellular	38.45	35.33
Os09t0298100-00	Rice	plastid	38.1	34.84
Os06t0326400-01	Rice	cytosol, plasma membrane, plastid	37.92	34.57
Os02t0714200-01	Rice	cytosol, plasma membrane	36.51	33.55

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	Gene3D:1.10.10.480
MapMan:2.1.1.1.2	Gene3D:3.40.50.450	Gene3D:3.40.50.460	EntrezGene:4340643	InterPro:ATP_PFK	ProteinID:BAD45669.1
ProteinID:BAF19198.1	ProteinID:BAS97035.1	ProteinID:EAZ36477.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003872	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005975	GO:GO:0006002	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0046835	GO:GO:0046872	GO:GO:0047334	GO:GO:0061615
HAMAP:MF_01980	EnsemblPlantsGene:Os06g0247500	EnsemblPlants:Os06t0247500-01	PFAM:PF00365	PIRSF:PIRSF005677	InterPro:PKF_sf
PRINTS:PR00476	PANTHER:PTHR43650	PANTHER:PTHR43650:SF6	InterPro:PfpB_PPi_PFK	InterPro:Phosphofructokinase_dom	UniProt:Q654U8
SUPFAM:SSF53784	TIGRFAMs:TIGR02477	UniParc:UPI000043A381	RefSeq:XP_015643982.1	SEG:seg	:

Description

pyrophosphate-dependent phosphofrucokinase beta-subunit, PFP beta-subunit, Pyrophosphate-Fru-6-P1-phosphotransferasePyrophosphate-fructose 6-phosphate 1-phosphotransferase (PFP) beta subunit, Regulation of carbon metabolism during grain filling (Os06t0247500-01);Similar to pyrophosphate--fructose 6-phosphate 1-phosphotransferase beta subunit. (Os06t0247500-02)

Coordinates

chr6:-:7649087..7654307

Molecular Weight (calculated)

61265.5 Da

IEP (calculated)

6.381

GRAVY (calculated)

-0.169

Length

567 amino acids

Sequence
(BLAST)

001: MAAAAVAANG GGDGAQASNA PAPTRLASVY SEVQTSRLKH ALPLPSVLRS PFALADGPAS SAAGNPGEIA KLFPNLFGQP SVSLVPSPEP ASTRPLKVGV
101: VLSGGQAPGG HNVICGIFDY LQEYAKGSVM YGFKGGPAGV MKCKYVELTA DYVYPYRNQG GFDMICSGRD KIETPEQFKQ AEDTVNKLDL DGLVVIGGDD
201: SNTNACLLAE YFRGKNMKTR VIGCPKTIDG DLKCKEVPTS FGFDTACKIY SEMIGNVMTD ARSTGKYYHF VRLMGRAASH ITLECALQTH PNVALIGEEV
301: AAKKETLKSV TDYITDIVCK RAELGYNYGV ILIPEGLIDF IPEVQKLIAE LNEILAHDVV DEAGAWKSKL QPESRQLFDF LPKTIQEQLL LERDPHGNVQ
401: VAKIETEKML IAMVETELEK RKAEGKYPAH FRGQSHFFGY EGRCGLPTIF DSNYCYALGY GSGALLQCGK TGLITSVGNL AAPVEEWTVG GTALTSLMDV
501: ERRHGKYKPV IKKAMVELDG APFKKFASLR DEWSLKNHYI SPGPIQFSGP GSNDANHTLM LELGAEA

Best Arabidopsis Sequence Match ( AT1G12000.1 )
(BLAST)

001: MAPALAVTRD LTAVGSPENA PAKGRASVYS EVQSSRINNT LPLPSVLKGA FKIVEGPASS AAGNPDEIAK LFPGLYGQPS VAVVPDQDAP SSAPKLKIGV
101: VLSGGQAPGG HNVISGLFDY LQERAKGSTF YGFKGGPAGI MKCKYVELNA EYIQPYRNQG GFDMICSGRD KIETPDQFKQ AEETAKKLDL DGLVVIGGDD
201: SNTNACLLAE NFRSKNLKTR VIGCPKTIDG DLKCKEVPTS FGFDTACKIY SEMIGNVMID ARSTGKYYHF VRLMGRAASH ITLECALQTH PNITIIGEEV
301: SAQKQTLKNV TDYMVDVICK RAELGYNYGV ILIPEGLIDF IPEVQELIAE LNEILANEVV DENGLWKKKL TEQSLKLFDL LPEAIQEQLM LERDPHGNVQ
401: VAKIETEKML IQMVETELEK RKQAGAYKGQ FMGQSHFFGY EGRCGLPTNF DATYCYALGY GAGVLLNSGK TGLISSVGNL AAPVEEWTVG GTALTALMDV
501: ERRHGKFKPV IKKAMVELEG APFKKFASLR EEWALKNRYI SPGPIQFTGP GSDSLSHTLL LELGAQ

Arabidopsis Description

PFP-BETA1Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4M5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.