CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21025	Canola	cytosol	17.77	62.11
CDY34604	Canola	cytosol	81.93	53.65
CDY30046	Canola	plastid	83.13	48.76
CDX98086	Canola	plastid	82.83	48.59
GSMUA_Achr8P22590_001	Banana	cytosol, plastid	70.78	41.67
VIT_10s0116g00360.t01	Wine grape	cytosol, plastid	69.28	40.71
GSMUA_Achr7P02210_001	Banana	plastid	68.98	40.6
Zm00001d037278_P001	Maize	plastid	66.57	39.18
TraesCS7D01G200800.1	Wheat	plastid	65.66	38.93
TraesCS7B01G104400.1	Wheat	plastid	65.66	38.93
TraesCS7A01G198200.2	Wheat	golgi, plastid	65.66	38.93
Os06t0247500-01	Rice	plastid	65.96	38.62
Zm00001d044754_P001	Maize	extracellular, plastid	66.57	38.1
GSMUA_Achr3P08040_001	Banana	cytosol, mitochondrion	69.58	37.93
CDX94541	Canola	cytosol	70.78	37.07
HORVU7Hr1G040550.9	Barley	cytosol, peroxisome, plastid	64.16	31.98
CDX88295	Canola	cytosol	33.73	18.15
CDX87587	Canola	cytosol	33.43	17.99
CDY67203	Canola	cytosol	33.13	17.77
CDY67022	Canola	cytosol	33.13	17.77
CDY33660	Canola	cytosol	31.02	17.22
CDX96611	Canola	cytosol	30.72	17.06
OQU89184	Sorghum	cytosol	3.01	8.06
CDX94695	Canola	cytosol	1.51	5.75

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	MapMan:2.1.1.1.2
Gene3D:3.40.50.460	GO:A0A078H162	UniProt:A0A078H162	EnsemblPlants:CDY31232	ProteinID:CDY31232	ProteinID:CDY31232.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0003872	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0061615	EnsemblPlantsGene:GSBRNA2T00047365001	InterPro:PKF_sf	PANTHER:PTHR43650
PANTHER:PTHR43650:SF6	MetaCyc:PWY-1042	MetaCyc:PWY-1861	MetaCyc:PWY-5484	MetaCyc:PWY-7385	SUPFAM:SSF53784
UniPathway:UPA00109	UniParc:UPI0004EE4F98	:	:	:	:

Description

BnaC08g15270DBnaC08g15270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H162]

Coordinates

chrLK032269:-:116568..119056

Molecular Weight (calculated)

36667.9 Da

IEP (calculated)

6.765

GRAVY (calculated)

0.019

Length

332 amino acids

Sequence
(BLAST)

001: MSYVPLLLFS QNLDKIKTLK TRVTGCPKTI DGDLKCIEVP TSFGFDTACK YYHSVRLMGR AASHIMLECA LQTHPNITII GEKVSAQKQT LKNVTDYMVD
101: VICKRSELGY NYGVILIPEG LIDFIPEVQE LIAELNEILA NEVVDESGER KKKLAEQSLK LFDLLPEAIQ EQLILEREPH GNVQVAKIET EKMLIQMLVL
201: TRDSSWGSLI SSGRCGLPTN FDATYCYALG YGAGVLLNSG KTGLISSVLT VMGACGELGC SSLMDVERRH GKFKFVIKQA MVELEGAPFK KFASLREVWA
301: LKNRYISPGP IQFTGPGSDA LSHTLLLKLG DQ

Best Arabidopsis Sequence Match ( AT1G12000.1 )
(BLAST)

001: MAPALAVTRD LTAVGSPENA PAKGRASVYS EVQSSRINNT LPLPSVLKGA FKIVEGPASS AAGNPDEIAK LFPGLYGQPS VAVVPDQDAP SSAPKLKIGV
101: VLSGGQAPGG HNVISGLFDY LQERAKGSTF YGFKGGPAGI MKCKYVELNA EYIQPYRNQG GFDMICSGRD KIETPDQFKQ AEETAKKLDL DGLVVIGGDD
201: SNTNACLLAE NFRSKNLKTR VIGCPKTIDG DLKCKEVPTS FGFDTACKIY SEMIGNVMID ARSTGKYYHF VRLMGRAASH ITLECALQTH PNITIIGEEV
301: SAQKQTLKNV TDYMVDVICK RAELGYNYGV ILIPEGLIDF IPEVQELIAE LNEILANEVV DENGLWKKKL TEQSLKLFDL LPEAIQEQLM LERDPHGNVQ
401: VAKIETEKML IQMVETELEK RKQAGAYKGQ FMGQSHFFGY EGRCGLPTNF DATYCYALGY GAGVLLNSGK TGLISSVGNL AAPVEEWTVG GTALTALMDV
501: ERRHGKFKPV IKKAMVELEG APFKKFASLR EEWALKNRYI SPGPIQFTGP GSDSLSHTLL LELGAQ

Arabidopsis Description

PFP-BETA1Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4M5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.