CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g026340.1.1	Tomato	cytosol	48.28	43.3
CDY34604	Canola	cytosol	80.46	13.81
CDX98086	Canola	plastid	83.91	12.9
CDY30046	Canola	plastid	83.91	12.9
CDX94541	Canola	cytosol	70.11	9.62
CDX87587	Canola	cytosol	41.38	5.83
CDX96611	Canola	cytosol	37.93	5.52
CDY33660	Canola	cytosol	37.93	5.52
CDX88295	Canola	cytosol	39.08	5.51
CDY67022	Canola	cytosol	37.93	5.33
CDY67203	Canola	cytosol	37.93	5.33
CDY31232	Canola	cytosol, plastid	5.75	1.51
CDY21025	Canola	cytosol	1.15	1.05
Bra016442.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	Gene3D:3.40.50.450
MapMan:35.1	GO:A0A078DZB4	EnsemblPlants:CDX94695	ProteinID:CDX94695	ProteinID:CDX94695.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0003872	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00158058001	InterPro:PKF_sf	PANTHER:PTHR43650	PANTHER:PTHR43650:SF6	MetaCyc:PWY-1042
MetaCyc:PWY-1861	MetaCyc:PWY-5484	MetaCyc:PWY-7385	SUPFAM:SSF53784	UniPathway:UPA00109	UniParc:UPI0004EB6FBE
SEG:seg	:	:	:	:	:

Description

BnaC07g09630D

Coordinates

chrLK031883:+:1249475..1251621

Molecular Weight (calculated)

9902.6 Da

IEP (calculated)

4.185

GRAVY (calculated)

-0.597

Length

87 amino acids

Sequence
(BLAST)

1: MKCKYVELNA EYIQPYRNQG GFDMICSGRD KIETPEQFKQ AEETAKKLDL DGLVVIDGDD SNTNACLLAE NFRPSESIPW REIDVIS

Best Arabidopsis Sequence Match ( AT1G12000.1 )
(BLAST)

001: MAPALAVTRD LTAVGSPENA PAKGRASVYS EVQSSRINNT LPLPSVLKGA FKIVEGPASS AAGNPDEIAK LFPGLYGQPS VAVVPDQDAP SSAPKLKIGV
101: VLSGGQAPGG HNVISGLFDY LQERAKGSTF YGFKGGPAGI MKCKYVELNA EYIQPYRNQG GFDMICSGRD KIETPDQFKQ AEETAKKLDL DGLVVIGGDD
201: SNTNACLLAE NFRSKNLKTR VIGCPKTIDG DLKCKEVPTS FGFDTACKIY SEMIGNVMID ARSTGKYYHF VRLMGRAASH ITLECALQTH PNITIIGEEV
301: SAQKQTLKNV TDYMVDVICK RAELGYNYGV ILIPEGLIDF IPEVQELIAE LNEILANEVV DENGLWKKKL TEQSLKLFDL LPEAIQEQLM LERDPHGNVQ
401: VAKIETEKML IQMVETELEK RKQAGAYKGQ FMGQSHFFGY EGRCGLPTNF DATYCYALGY GAGVLLNSGK TGLISSVGNL AAPVEEWTVG GTALTALMDV
501: ERRHGKFKPV IKKAMVELEG APFKKFASLR EEWALKNRYI SPGPIQFTGP GSDSLSHTLL LELGAQ

Arabidopsis Description

PFP-BETA1Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4M5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.