Factsheet for GSMUA_Achr3P08040_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 3
extracellular 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P22590_001	Banana	cytosol, plastid	85.55	92.38
GSMUA_Achr7P02210_001	Banana	plastid	84.89	91.67
VIT_10s0116g00360.t01	Wine grape	cytosol, plastid	78.33	84.42
Zm00001d037278_P001	Maize	plastid	78.16	84.4
KRH11497	Soybean	nucleus	77.83	84.34
KRH71798	Soybean	cytosol	14.78	84.11
KRH36515	Soybean	endoplasmic reticulum, mitochondrion	77.34	83.81
VIT_12s0059g01220.t01	Wine grape	plastid	76.19	82.42
Os06t0247500-01	Rice	plastid	76.35	82.01
PGSC0003DMT400001785	Potato	plastid	74.22	81.59
KRH51142	Soybean	endoplasmic reticulum, nucleus	75.86	81.34
Solyc07g049280.2.1	Tomato	nucleus, unclear	73.89	81.23
Zm00001d044754_P001	Maize	extracellular, plastid	77.34	81.21
TraesCS7D01G200800.1	Wheat	plastid	74.38	80.89
TraesCS7A01G198200.2	Wheat	golgi, plastid	74.38	80.89
TraesCS7B01G104400.1	Wheat	plastid	74.22	80.71
Solyc02g081160.2.1	Tomato	plastid	75.04	80.32
PGSC0003DMT400043111	Potato	plastid	74.88	80.14
CDY34604	Canola	cytosol	66.34	79.68
CDY30046	Canola	plastid	73.89	79.51
Bra029482.1-P	Field mustard	cytosol	74.06	79.4
CDX98086	Canola	plastid	73.73	79.33
Bra019733.1-P	Field mustard	plastid	73.56	79.15
AT1G12000.1	Thale cress	plastid	73.4	78.98
AT4G04040.1	Thale cress	cytosol	73.4	78.56
KRH02012	Soybean	endoplasmic reticulum, plastid	73.56	77.91
CDX94541	Canola	cytosol	73.56	70.66
CDY21025	Canola	cytosol	11.0	70.53
CDY31232	Canola	cytosol, plastid	37.93	69.58
HORVU7Hr1G040550.9	Barley	cytosol, peroxisome, plastid	72.91	66.67
Bra016799.1-P	Field mustard	cytosol	35.14	62.94
KRH71808	Soybean	cytosol	16.58	55.19
GSMUA_AchrUn_...	Banana	cytosol	8.05	36.3
GSMUA_Achr7P20550_001	Banana	cytosol	34.81	34.58
GSMUA_AchrUn_...	Banana	cytosol	35.3	34.51
GSMUA_Achr3P11650_001	Banana	cytosol	33.66	33.17
GSMUA_Achr9P12330_001	Banana	cytosol	33.5	33.12
GSMUA_Achr1P06200_001	Banana	cytosol	33.33	32.9
GSMUA_AchrUn_...	Banana	cytosol	4.76	29.0
OQU89184	Sorghum	cytosol	4.27	20.97

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	Gene3D:1.10.10.480
MapMan:2.1.1.1.2	Gene3D:3.40.50.450	Gene3D:3.40.50.460	InterPro:ATP_PFK	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003872	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006002	GO:GO:0006091	GO:GO:0006096
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0046835	GO:GO:0046872	GO:GO:0047334
GO:GO:0061615	EnsemblPlantsGene:GSMUA_Achr3G08040_001	EnsemblPlants:GSMUA_Achr3P08040_001	EnsemblPlants:GSMUA_Achr3T08040_001	UniProt:M0SCS1	HAMAP:MF_01980
PFAM:PF00365	PIRSF:PIRSF005677	InterPro:PKF_sf	PRINTS:PR00476	PANTHER:PTHR43650	PANTHER:PTHR43650:SF6
InterPro:PfpB_PPi_PFK	InterPro:Phosphofructokinase_dom	SUPFAM:SSF53784	TIGRFAMs:TIGR02477	UniParc:UPI0002954E6F	SEG:seg

Description

Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta [Source:GMGC_GENE;Acc:GSMUA_Achr3G08040_001]

Coordinates

chr3:+:5633347..5646890

Molecular Weight (calculated)

66303.9 Da

IEP (calculated)

7.176

GRAVY (calculated)

-0.168

Length

609 amino acids

Sequence
(BLAST)

001: MQSPLAQRSN HPNRHGFLGS QYTRCGALSL LSLISLLCSV RSPPSMATAN SVLANDGAKG PAPPRLASVY SEVQTSRLNH PLPLPSVLKG PFKLVDGPPS
101: SAAGNPDEIA KLFPNLFGQP SANLVPTGSD PSDLAGGLRI GVVLSGGQAP GGHNVISGIF DYLQERTNGS ILYGFKGGPA GIMKCKYVEL TPDFIYPYRN
201: QGGFDMICSG RDKIETPEQF KQAEETAMKL DLDGLVVIGG DDSNTNACLL AEYFRQKNMK TRVIGCPKTI DGDLKCKEVP ASFGFDTACK IYSEMIGNVM
301: TDARSTGKYY HFVRLMGRAA SHITLECALQ THPNIAFIGE EVAAKKQTLK NVTDYITDVI CKRAELGYNY GVILIPEGLI DFIPEVQQLI AELNEILAHD
401: VVDEDGLWKK KLQHQSLHLF EFLPQAIKEQ LLLERDPHGN VQVSKIETEK MLISMVETEL EKRKLEGKYA GHFKGQSHFF GYEGRCGLPT NFDATYCYAL
501: GYAAGALLCS GKTGLISSVG NLNAPVNEWT VGGTALTSLM DVERRHGKFK PVIKKAMVEL EGAPFQKFAS MRDVWALKNR YISPGPIQFI GPGSNDVNHT
601: LLLELGAQA

Best Arabidopsis Sequence Match ( AT1G12000.1 )
(BLAST)

001: MAPALAVTRD LTAVGSPENA PAKGRASVYS EVQSSRINNT LPLPSVLKGA FKIVEGPASS AAGNPDEIAK LFPGLYGQPS VAVVPDQDAP SSAPKLKIGV
101: VLSGGQAPGG HNVISGLFDY LQERAKGSTF YGFKGGPAGI MKCKYVELNA EYIQPYRNQG GFDMICSGRD KIETPDQFKQ AEETAKKLDL DGLVVIGGDD
201: SNTNACLLAE NFRSKNLKTR VIGCPKTIDG DLKCKEVPTS FGFDTACKIY SEMIGNVMID ARSTGKYYHF VRLMGRAASH ITLECALQTH PNITIIGEEV
301: SAQKQTLKNV TDYMVDVICK RAELGYNYGV ILIPEGLIDF IPEVQELIAE LNEILANEVV DENGLWKKKL TEQSLKLFDL LPEAIQEQLM LERDPHGNVQ
401: VAKIETEKML IQMVETELEK RKQAGAYKGQ FMGQSHFFGY EGRCGLPTNF DATYCYALGY GAGVLLNSGK TGLISSVGNL AAPVEEWTVG GTALTALMDV
501: ERRHGKFKPV IKKAMVELEG APFKKFASLR EEWALKNRYI SPGPIQFTGP GSDSLSHTLL LELGAQ

Arabidopsis Description

PFP-BETA1Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4M5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.