CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, nucleus

Predictor Summary:

cytosol 3
extracellular 1
plastid 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

nucleus: 21132161
endoplasmic reticulum: 27224218

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71798	Soybean	cytosol	17.96	95.33
KRH02012	Soybean	endoplasmic reticulum, plastid	94.37	93.22
KRH33517	Soybean	cytosol	16.37	92.08
KRH36515	Soybean	endoplasmic reticulum, mitochondrion	86.44	87.37
KRH11497	Soybean	nucleus	86.44	87.37
VIT_10s0116g00360.t01	Wine grape	cytosol, plastid	83.8	84.25
GSMUA_Achr8P22590_001	Banana	cytosol, plastid	81.51	82.09
KRH71808	Soybean	cytosol	26.23	81.42
Bra029482.1-P	Field mustard	cytosol	81.16	81.16
Zm00001d037278_P001	Maize	plastid	80.46	81.03
GSMUA_Achr7P02210_001	Banana	plastid	80.46	81.03
Os06t0247500-01	Rice	plastid	80.63	80.78
AT4G04040.1	Thale cress	cytosol	80.63	80.49
Zm00001d044754_P001	Maize	extracellular, plastid	80.63	78.97
TraesCS7D01G200800.1	Wheat	plastid	77.46	78.57
TraesCS7A01G198200.2	Wheat	golgi, plastid	77.46	78.57
TraesCS7B01G104400.1	Wheat	plastid	77.29	78.39
GSMUA_Achr3P08040_001	Banana	cytosol, mitochondrion	81.34	75.86
CDX94541	Canola	cytosol	80.46	72.08
KRH25835	Soybean	cytosol	25.0	67.94
KRH15565	Soybean	extracellular	15.14	66.67
HORVU7Hr1G040550.9	Barley	cytosol, peroxisome, plastid	74.82	63.81
KRG99300	Soybean	cytosol	22.18	41.58
KRH49514	Soybean	cytosol, endoplasmic reticulum, nucleus	36.8	33.87
KRG89187	Soybean	endoplasmic reticulum	36.8	33.87
OQU89184	Sorghum	cytosol	4.4	20.16

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	Gene3D:1.10.10.480
EntrezGene:100782857	MapMan:2.1.1.1.2	Gene3D:3.40.50.450	Gene3D:3.40.50.460	EMBL:ACUP02004729	InterPro:ATP_PFK
EnsemblPlantsGene:GLYMA_07G263800	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003872	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975
GO:GO:0006002	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0046835	GO:GO:0046872	GO:GO:0047334	GO:GO:0061615	UniProt:I1KNH4	EnsemblPlants:KRH51142
ProteinID:KRH51142	ProteinID:KRH51142.1	HAMAP:MF_01980	PFAM:PF00365	PIRSF:PIRSF005677	InterPro:PKF_sf
PRINTS:PR00476	PANTHER:PTHR43650	PANTHER:PTHR43650:SF6	MetaCyc:PWY-1042	MetaCyc:PWY-1861	MetaCyc:PWY-5484
MetaCyc:PWY-7385	InterPro:PfpB_PPi_PFK	InterPro:Phosphofructokinase_dom	SUPFAM:SSF53784	TIGRFAMs:TIGR02477	UniParc:UPI0002339081
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:43819293..43825732

Molecular Weight (calculated)

62106.7 Da

IEP (calculated)

6.699

GRAVY (calculated)

-0.192

Length

568 amino acids

Sequence
(BLAST)

001: MAPSFAINGG FPGARVTPPS VTGRFAAVYS EVQNSRIDHE LPLPSVLKNP FIIVDGPQSS AAGNPEEIAK LFPKLFGQPS AALVPSDSHA PHANRKLKIG
101: VVLSGGQAPG GHNVISGIFD YLQDLAEGST LYGFRGGPAG IMKCKYVELT SDYIYPYRNQ GGFDMIRSGR DKIETPEQFK QAEETVQKLN LDGLVVIGGD
201: DSNTNACLLA EHFRSKNMKT RVIGCPKTID GDLKCKEVPT SFGFDTACKI YAEMIGNVMI DARSTGKYYH FVRLMGRAAS HITLECALQT HPNITIIGEE
301: VAAKKMTLKD VTDYIVNIIS KRAEDNYNYG VILIPEGLID FIPEVQHLIA ELNEILANDA VDEGGLWKKK LTDQSLKLFE FLPKAIQEQL MLERDPHGNV
401: QVAKIETEKM LIQMVETELE KRKQQGTYKG GFRGQSHFFG YEGRCGLPTN FDSTYCYALG YGAAALLQSG KTGLISSVGN LCAPVEEWTV GGTALTSLMD
501: VERRHGKFKP VIKKAMVELE GAPFKKFASL RDEWALKNCY ISPGPIQFTG PGSDAINHTL LLELGAQA

Best Arabidopsis Sequence Match ( AT1G12000.1 )
(BLAST)

001: MAPALAVTRD LTAVGSPENA PAKGRASVYS EVQSSRINNT LPLPSVLKGA FKIVEGPASS AAGNPDEIAK LFPGLYGQPS VAVVPDQDAP SSAPKLKIGV
101: VLSGGQAPGG HNVISGLFDY LQERAKGSTF YGFKGGPAGI MKCKYVELNA EYIQPYRNQG GFDMICSGRD KIETPDQFKQ AEETAKKLDL DGLVVIGGDD
201: SNTNACLLAE NFRSKNLKTR VIGCPKTIDG DLKCKEVPTS FGFDTACKIY SEMIGNVMID ARSTGKYYHF VRLMGRAASH ITLECALQTH PNITIIGEEV
301: SAQKQTLKNV TDYMVDVICK RAELGYNYGV ILIPEGLIDF IPEVQELIAE LNEILANEVV DENGLWKKKL TEQSLKLFDL LPEAIQEQLM LERDPHGNVQ
401: VAKIETEKML IQMVETELEK RKQAGAYKGQ FMGQSHFFGY EGRCGLPTNF DATYCYALGY GAGVLLNSGK TGLISSVGNL AAPVEEWTVG GTALTALMDV
501: ERRHGKFKPV IKKAMVELEG APFKKFASLR EEWALKNRYI SPGPIQFTGP GSDSLSHTLL LELGAQ

Arabidopsis Description

PFP-BETA1Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4M5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.