CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid

Predictor Summary:

plastid 9
extracellular 1
cytosol 1

Predictors

GFP

MS/MS

Papers

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71798	Soybean	cytosol	17.57	94.39
KRH51142	Soybean	endoplasmic reticulum, nucleus	93.22	94.37
KRH33517	Soybean	cytosol	16.0	91.09
KRH36515	Soybean	endoplasmic reticulum, mitochondrion	82.78	84.7
KRH11497	Soybean	nucleus	82.78	84.7
VIT_10s0116g00360.t01	Wine grape	cytosol, plastid	80.52	81.95
GSMUA_Achr8P22590_001	Banana	cytosol, plastid	78.26	79.79
Bra029482.1-P	Field mustard	cytosol	78.26	79.23
GSMUA_Achr7P02210_001	Banana	plastid	77.22	78.72
AT4G04040.1	Thale cress	cytosol	77.74	78.56
Zm00001d037278_P001	Maize	plastid	77.04	78.55
Os06t0247500-01	Rice	plastid	76.87	77.95
TraesCS7D01G200800.1	Wheat	plastid	74.78	76.79
TraesCS7A01G198200.2	Wheat	golgi, plastid	74.78	76.79
TraesCS7B01G104400.1	Wheat	plastid	74.61	76.61
Zm00001d044754_P001	Maize	extracellular, plastid	77.04	76.38
GSMUA_Achr3P08040_001	Banana	cytosol, mitochondrion	77.91	73.56
CDX94541	Canola	cytosol	78.09	70.82
KRH71808	Soybean	cytosol	22.09	69.4
KRH15565	Soybean	extracellular	14.61	65.12
HORVU7Hr1G040550.9	Barley	cytosol, peroxisome, plastid	71.83	62.01
KRH25835	Soybean	cytosol	22.43	61.72
KRG99300	Soybean	cytosol	19.13	36.3
KRH49514	Soybean	cytosol, endoplasmic reticulum, nucleus	34.78	32.41
KRG89187	Soybean	endoplasmic reticulum	34.78	32.41
OQU89184	Sorghum	cytosol	4.17	19.35

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	Gene3D:1.10.10.480
MapMan:2.1.1.1.2	Gene3D:3.40.50.450	Gene3D:3.40.50.460	EMBL:ACUP02010293	InterPro:ATP_PFK	EnsemblPlantsGene:GLYMA_17G010100
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003872	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006002
GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0046835
GO:GO:0046872	GO:GO:0047334	GO:GO:0061615	UniProt:K7MJC5	EnsemblPlants:KRH02012	ProteinID:KRH02012
ProteinID:KRH02012.1	HAMAP:MF_01980	PFAM:PF00365	PIRSF:PIRSF005677	InterPro:PKF_sf	PRINTS:PR00476
PANTHER:PTHR43650	PANTHER:PTHR43650:SF6	MetaCyc:PWY-1042	MetaCyc:PWY-1861	MetaCyc:PWY-5484	MetaCyc:PWY-7385
InterPro:PfpB_PPi_PFK	InterPro:Phosphofructokinase_dom	SUPFAM:SSF53784	TIGRFAMs:TIGR02477	UniParc:UPI000296DD50	SEG:seg

Description

hypothetical protein

Coordinates

chr17:+:807962..813577

Molecular Weight (calculated)

63121.0 Da

IEP (calculated)

6.702

GRAVY (calculated)

-0.127

Length

575 amino acids

Sequence
(BLAST)

001: MAPSFAINGA FPSARVTPPS VTGRFAAVYS EVQNSRIDHA LPLPSVLKNP FIIVDGPQSS AAGNPEEIAK LFPNLFGQPS AALVPSDSHA LPVNQKLKIG
101: VVLSGGQAPG GHNVISGIFD YLQDLAEGST LYGFRGGPAG IMNFTYSFVY SNMVVWNKYF PFTVMLFGGF DMIRSGRDKI ETPEQFKQAE ETVQKLDLDG
201: LVVIGGDDSN TNACLLAEHF RSKNMKTRVI GCPKTIDGDL KCKEVPTSFG FDTACKIYAE MIGNVMIDAR STGKYYHFVR LMGRAASHIT LECALQTHPN
301: ITIIGEEVAA KKMTLKDVTD YIVNIISKRA EDNYNYGVIL IPEGLIDFIP EVQHLIAELN EILAHDTVDE GGLWKKKLTD QSLKLFEFLP KAMQEQLMLE
401: RDPHGNVQVA KIETEKMLIQ MVETELEKRK QQGSYKGGFR GQSHFFGYEG RCGLPTNFDS TYCYALGYGA AALLQSGKTG LISSVGNLCA PVEEWTVGGT
501: ALTSLMDVER RHGKFKPVIK KAMVELEGAP FKKFASLRDE WALKNRYISP GPIQFTGRGS DAINHTLLLE FGAQA

Best Arabidopsis Sequence Match ( AT1G12000.1 )
(BLAST)

001: MAPALAVTRD LTAVGSPENA PAKGRASVYS EVQSSRINNT LPLPSVLKGA FKIVEGPASS AAGNPDEIAK LFPGLYGQPS VAVVPDQDAP SSAPKLKIGV
101: VLSGGQAPGG HNVISGLFDY LQERAKGSTF YGFKGGPAGI MKCKYVELNA EYIQPYRNQG GFDMICSGRD KIETPDQFKQ AEETAKKLDL DGLVVIGGDD
201: SNTNACLLAE NFRSKNLKTR VIGCPKTIDG DLKCKEVPTS FGFDTACKIY SEMIGNVMID ARSTGKYYHF VRLMGRAASH ITLECALQTH PNITIIGEEV
301: SAQKQTLKNV TDYMVDVICK RAELGYNYGV ILIPEGLIDF IPEVQELIAE LNEILANEVV DENGLWKKKL TEQSLKLFDL LPEAIQEQLM LERDPHGNVQ
401: VAKIETEKML IQMVETELEK RKQAGAYKGQ FMGQSHFFGY EGRCGLPTNF DATYCYALGY GAGVLLNSGK TGLISSVGNL AAPVEEWTVG GTALTALMDV
501: ERRHGKFKPV IKKAMVELEG APFKKFASLR EEWALKNRYI SPGPIQFTGP GSDSLSHTLL LELGAQ

Arabidopsis Description

PFP-BETA1Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4M5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.