CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71798	Soybean	cytosol	89.11	84.11
KRH15565	Soybean	extracellular	65.35	51.16
KRH51142	Soybean	endoplasmic reticulum, nucleus	92.08	16.37
KRH02012	Soybean	endoplasmic reticulum, plastid	91.09	16.0
KRH11497	Soybean	nucleus	84.16	15.12
KRH36515	Soybean	endoplasmic reticulum, mitochondrion	84.16	15.12
KRH49514	Soybean	cytosol, endoplasmic reticulum, nucleus	40.59	6.65
KRG89187	Soybean	endoplasmic reticulum	39.6	6.48
KRG99300	Soybean	cytosol	0.0	0.0
KRH25835	Soybean	cytosol	0.0	0.0
KRH71808	Soybean	cytosol	0.0	0.0

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	EntrezGene:100816216
MapMan:2.1.1.1.2	Gene3D:3.40.50.450	EMBL:ACUP02006513	EnsemblPlantsGene:GLYMA_10G128200	GO:GO:0003674	GO:GO:0003824
GO:GO:0003872	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0061615	UniProt:K7LJ29	EnsemblPlants:KRH33517	ProteinID:KRH33517	ProteinID:KRH33517.1	InterPro:PKF_sf
PANTHER:PTHR43650	PANTHER:PTHR43650:SF6	MetaCyc:PWY-1042	MetaCyc:PWY-1861	MetaCyc:PWY-5484	MetaCyc:PWY-7385
SUPFAM:SSF53784	UniParc:UPI00029618D2	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:34092489..34095657

Molecular Weight (calculated)

11171.3 Da

IEP (calculated)

8.063

GRAVY (calculated)

-0.326

Length

101 amino acids

Sequence
(BLAST)

001: MLIQMVETEL EKRKQWGTYK GGFRGQSHFF GYEGRCGLPT NFDSTYCYAL GYGAATILQS GKTGLISSVG NLCAPVEEWT VGGTALSSLM DVERRHGMHQ
101: R

Best Arabidopsis Sequence Match ( AT1G12000.1 )
(BLAST)

001: MAPALAVTRD LTAVGSPENA PAKGRASVYS EVQSSRINNT LPLPSVLKGA FKIVEGPASS AAGNPDEIAK LFPGLYGQPS VAVVPDQDAP SSAPKLKIGV
101: VLSGGQAPGG HNVISGLFDY LQERAKGSTF YGFKGGPAGI MKCKYVELNA EYIQPYRNQG GFDMICSGRD KIETPDQFKQ AEETAKKLDL DGLVVIGGDD
201: SNTNACLLAE NFRSKNLKTR VIGCPKTIDG DLKCKEVPTS FGFDTACKIY SEMIGNVMID ARSTGKYYHF VRLMGRAASH ITLECALQTH PNITIIGEEV
301: SAQKQTLKNV TDYMVDVICK RAELGYNYGV ILIPEGLIDF IPEVQELIAE LNEILANEVV DENGLWKKKL TEQSLKLFDL LPEAIQEQLM LERDPHGNVQ
401: VAKIETEKML IQMVETELEK RKQAGAYKGQ FMGQSHFFGY EGRCGLPTNF DATYCYALGY GAGVLLNSGK TGLISSVGNL AAPVEEWTVG GTALTALMDV
501: ERRHGKFKPV IKKAMVELEG APFKKFASLR EEWALKNRYI SPGPIQFTGP GSDSLSHTLL LELGAQ

Arabidopsis Description

PFP-BETA1Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4M5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.