CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
extracellular 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33517	Soybean	cytosol	84.11	89.11
KRH15565	Soybean	extracellular	62.62	51.94
KRH51142	Soybean	endoplasmic reticulum, nucleus	95.33	17.96
KRH02012	Soybean	endoplasmic reticulum, plastid	94.39	17.57
KRH11497	Soybean	nucleus	87.85	16.73
KRH36515	Soybean	endoplasmic reticulum, mitochondrion	87.85	16.73
Zm00001d037278_P001	Maize	plastid	85.05	16.13
GSMUA_Achr8P22590_001	Banana	cytosol, plastid	85.05	16.13
AT4G04040.1	Thale cress	cytosol	85.05	15.99
GSMUA_Achr7P02210_001	Banana	plastid	83.18	15.78
VIT_10s0116g00360.t01	Wine grape	cytosol, plastid	83.18	15.75
TraesCS7D01G200800.1	Wheat	plastid	82.24	15.71
TraesCS7B01G104400.1	Wheat	plastid	82.24	15.71
TraesCS7A01G198200.2	Wheat	golgi, plastid	82.24	15.71
Zm00001d044754_P001	Maize	extracellular, plastid	85.05	15.69
Os06t0247500-01	Rice	plastid	82.24	15.52
Bra029482.1-P	Field mustard	cytosol	82.24	15.49
GSMUA_Achr3P08040_001	Banana	cytosol, mitochondrion	84.11	14.78
CDX94541	Canola	cytosol	82.24	13.88
HORVU7Hr1G040550.9	Barley	cytosol, peroxisome, plastid	82.24	13.21
KRH49514	Soybean	cytosol, endoplasmic reticulum, nucleus	40.19	6.97
KRG89187	Soybean	endoplasmic reticulum	39.25	6.81
OQU89184	Sorghum	cytosol	6.54	5.65
KRH25835	Soybean	cytosol	0.0	0.0
KRH71808	Soybean	cytosol	0.0	0.0
KRG99300	Soybean	cytosol	0.0	0.0

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	EntrezGene:102659565
MapMan:2.1.1.1.2	Gene3D:3.40.50.450	EMBL:ACUP02001071	EnsemblPlantsGene:GLYMA_02G169400	GO:GO:0003674	GO:GO:0003824
GO:GO:0003872	GO:GO:0005975	GO:GO:0006091	GO:GO:0006096	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0061615	UniProt:K7K8W8	EnsemblPlants:KRH71798	ProteinID:KRH71798	ProteinID:KRH71798.1	InterPro:PKF_sf
PANTHER:PTHR43650	PANTHER:PTHR43650:SF6	MetaCyc:PWY-1042	MetaCyc:PWY-1861	MetaCyc:PWY-5484	MetaCyc:PWY-7385
SUPFAM:SSF53784	UniParc:UPI000296163D	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:26148558..26149406

Molecular Weight (calculated)

11670.1 Da

IEP (calculated)

8.828

GRAVY (calculated)

-0.210

Length

107 amino acids

Sequence
(BLAST)

001: MLIQMVETEL EKRKQQGTYK GGFGGQSHFF GYEGRCGLPT NFDSTYCYAL GYGVAALLQS GKTGLISSVG NLCAPVEEWI VGGTALTSLM DVERRHGKFK
101: PVIKKTN

Best Arabidopsis Sequence Match ( AT1G12000.1 )
(BLAST)

001: MAPALAVTRD LTAVGSPENA PAKGRASVYS EVQSSRINNT LPLPSVLKGA FKIVEGPASS AAGNPDEIAK LFPGLYGQPS VAVVPDQDAP SSAPKLKIGV
101: VLSGGQAPGG HNVISGLFDY LQERAKGSTF YGFKGGPAGI MKCKYVELNA EYIQPYRNQG GFDMICSGRD KIETPDQFKQ AEETAKKLDL DGLVVIGGDD
201: SNTNACLLAE NFRSKNLKTR VIGCPKTIDG DLKCKEVPTS FGFDTACKIY SEMIGNVMID ARSTGKYYHF VRLMGRAASH ITLECALQTH PNITIIGEEV
301: SAQKQTLKNV TDYMVDVICK RAELGYNYGV ILIPEGLIDF IPEVQELIAE LNEILANEVV DENGLWKKKL TEQSLKLFDL LPEAIQEQLM LERDPHGNVQ
401: VAKIETEKML IQMVETELEK RKQAGAYKGQ FMGQSHFFGY EGRCGLPTNF DATYCYALGY GAGVLLNSGK TGLISSVGNL AAPVEEWTVG GTALTALMDV
501: ERRHGKFKPV IKKAMVELEG APFKKFASLR EEWALKNRYI SPGPIQFTGP GSDSLSHTLL LELGAQ

Arabidopsis Description

PFP-BETA1Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4M5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.