Factsheet for VIT_12s0059g01220.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
extracellular 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400001785	Potato	plastid	81.53	82.85
Solyc07g049280.2.1	Tomato	nucleus, unclear	81.35	82.67
GSMUA_Achr8P22590_001	Banana	cytosol, plastid	82.59	82.45
VIT_10s0116g00360.t01	Wine grape	cytosol, plastid	82.59	82.3
GSMUA_Achr7P02210_001	Banana	plastid	81.71	81.56
Zm00001d037278_P001	Maize	plastid	79.57	79.43
Os06t0247500-01	Rice	plastid	79.75	79.19
TraesCS7A01G198200.2	Wheat	golgi, plastid	77.44	77.86
TraesCS7D01G200800.1	Wheat	plastid	77.44	77.86
TraesCS7B01G104400.1	Wheat	plastid	77.26	77.68
Zm00001d044754_P001	Maize	extracellular, plastid	79.57	77.24
GSMUA_Achr3P08040_001	Banana	cytosol, mitochondrion	82.42	76.19
HORVU7Hr1G040550.9	Barley	cytosol, peroxisome, plastid	75.84	64.11
VIT_18s0122g00510.t01	Wine grape	cytosol	36.94	33.77

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	Gene3D:1.10.10.480
EntrezGene:100244809	wikigene:100244809	MapMan:2.1.1.1.2	Gene3D:3.40.50.450	Gene3D:3.40.50.460	InterPro:ATP_PFK
ProteinID:CBI28853	ProteinID:CBI28853.3	UniProt:D7TED0	EMBL:FN595765	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0003872	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006002	GO:GO:0006091	GO:GO:0006096
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0046835	GO:GO:0046872	GO:GO:0047334
GO:GO:0061615	EntrezGene:LOC100244809	wikigene:LOC100244809	HAMAP:MF_01980	PFAM:PF00365	PIRSF:PIRSF005677
InterPro:PKF_sf	PRINTS:PR00476	PANTHER:PTHR43650	PANTHER:PTHR43650:SF6	InterPro:PfpB_PPi_PFK	InterPro:Phosphofructokinase_dom
SUPFAM:SSF53784	TIGRFAMs:TIGR02477	UniParc:UPI00015CADED	ArrayExpress:VIT_12s0059g01220	EnsemblPlantsGene:VIT_12s0059g01220	EnsemblPlants:VIT_12s0059g01220.t01
unigene:Vvi.20339	RefSeq:XP_002271059	RefSeq:XP_002271059.1	:	:	:

Description

Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta [Source:UniProtKB/TrEMBL;Acc:D7TED0]

Coordinates

chr12:-:6144934..6150368

Molecular Weight (calculated)

61331.6 Da

IEP (calculated)

6.963

GRAVY (calculated)

-0.230

Length

563 amino acids

Sequence
(BLAST)

001: MSTSSAASNG CATAGRPSSG CPSSVFSEVQ TSRLRHSLPL PSVLRKPFNV SDGPPSSAAG NPDEIAKLFP NLFGQPSATL VPGEGLKKDQ GLRIGVVLSG
101: GQAPGGHNVI SGIFDYLQEC TTGSTMYGFK GGPAGIMNCK YVELTSEFIL PFRNQGGFHM ICSGRDKIET PEQFKQADET ASKLELDGLV VIGGDDSNTN
201: ACLLAENFRG KKLKTRVIGC PKTIDGDLKC KEVPTSFGFD TACKIYAEMI GNVMIDARST GKYYHFVRLM GRAASHITLE CALQTHPNIT IIGEEVALKK
301: LTLKNVTDYI TDIICKRAER GFNYGIILIP EGLIDFIPEV QQLIGELNEI LAHDVVDEGG QWKKKLRNQS QQLFDFLPQA IQEQLLLERD PHGNVQVAKI
401: ETEKMLIQMV DTELEKRRQE HSYNGKFNGQ SHFFGYEGRC GLPTNFDANY CYALGYGAGA LLHSGKTGLI SSVGNLGAPV EEWTVGGTAL TSLMDVERRH
501: GKFKPVIKKA MVELEGAPFK KFASLRDEWA LKNRYVSPGP VQFVGPTANE INHTLMLELG AQA

Best Arabidopsis Sequence Match ( AT1G12000.1 )
(BLAST)

001: MAPALAVTRD LTAVGSPENA PAKGRASVYS EVQSSRINNT LPLPSVLKGA FKIVEGPASS AAGNPDEIAK LFPGLYGQPS VAVVPDQDAP SSAPKLKIGV
101: VLSGGQAPGG HNVISGLFDY LQERAKGSTF YGFKGGPAGI MKCKYVELNA EYIQPYRNQG GFDMICSGRD KIETPDQFKQ AEETAKKLDL DGLVVIGGDD
201: SNTNACLLAE NFRSKNLKTR VIGCPKTIDG DLKCKEVPTS FGFDTACKIY SEMIGNVMID ARSTGKYYHF VRLMGRAASH ITLECALQTH PNITIIGEEV
301: SAQKQTLKNV TDYMVDVICK RAELGYNYGV ILIPEGLIDF IPEVQELIAE LNEILANEVV DENGLWKKKL TEQSLKLFDL LPEAIQEQLM LERDPHGNVQ
401: VAKIETEKML IQMVETELEK RKQAGAYKGQ FMGQSHFFGY EGRCGLPTNF DATYCYALGY GAGVLLNSGK TGLISSVGNL AAPVEEWTVG GTALTALMDV
501: ERRHGKFKPV IKKAMVELEG APFKKFASLR EEWALKNRYI SPGPIQFTGP GSDSLSHTLL LELGAQ

Arabidopsis Description

PFP-BETA1Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4M5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.