Factsheet for Solyc07g049280.2.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear, nucleus

Predictor Summary:

plastid 7
extracellular 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

nucleus: 25464976
unclear: 26455813

msms PMID: 26455813 doi

P Paul, P Chaturvedi, M Selymesi, A Ghatak, A Mesihovic, KD Scharf, W Weckwerth, S Simm, E Schleiff

Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400001785	Potato	plastid	98.56	98.56
VIT_12s0059g01220.t01	Wine grape	plastid	82.67	81.35
GSMUA_Achr8P22590_001	Banana	cytosol, plastid	81.23	79.79
GSMUA_Achr7P02210_001	Banana	plastid	81.05	79.61
Zm00001d037278_P001	Maize	plastid	81.05	79.61
Solyc02g081160.2.1	Tomato	plastid	80.87	78.73
Os06t0247500-01	Rice	plastid	80.51	78.66
Zm00001d044754_P001	Maize	extracellular, plastid	80.87	77.24
TraesCS7A01G198200.2	Wheat	golgi, plastid	76.9	76.07
TraesCS7D01G200800.1	Wheat	plastid	76.9	76.07
TraesCS7B01G104400.1	Wheat	plastid	76.71	75.89
GSMUA_Achr3P08040_001	Banana	cytosol, mitochondrion	81.23	73.89
Solyc04g026340.1.1	Tomato	cytosol	11.01	62.89
HORVU7Hr1G040550.9	Barley	cytosol, peroxisome, plastid	74.91	62.31
Solyc12g095760.1.1	Tomato	cytosol, extracellular, nucleus, unclear	38.63	34.68
Solyc04g082880.2.1	Tomato	cytosol, nucleus, plastid, unclear	37.91	34.09

Protein Annotations

KEGG:00010+2.7.1.11	KEGG:00030+2.7.1.11	KEGG:00051+2.7.1.11	KEGG:00052+2.7.1.11	KEGG:00680+2.7.1.11	Gene3D:1.10.10.480
MapMan:2.1.1.1.2	Gene3D:3.40.50.450	Gene3D:3.40.50.460	InterPro:ATP_PFK	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003872	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0006002	GO:GO:0006091
GO:GO:0006096	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0046835	GO:GO:0046872
GO:GO:0047334	GO:GO:0061615	UniProt:K4CF31	HAMAP:MF_01980	PFAM:PF00365	PIRSF:PIRSF005677
InterPro:PKF_sf	PRINTS:PR00476	PANTHER:PTHR43650	PANTHER:PTHR43650:SF6	InterPro:PfpB_PPi_PFK	InterPro:Phosphofructokinase_dom
SUPFAM:SSF53784	EnsemblPlantsGene:Solyc07g049280.2	EnsemblPlants:Solyc07g049280.2.1	TIGRFAMs:TIGR02477	UniParc:UPI000276B057	:

Description

Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta [Source:UniProtKB/TrEMBL;Acc:K4CF31]

Coordinates

chr7:-:59535346..59542928

Molecular Weight (calculated)

60094.3 Da

IEP (calculated)

7.729

GRAVY (calculated)

-0.169

Length

554 amino acids

Sequence
(BLAST)

001: MAAAAVGPGR STSSYSEVQH NRLIVSLPLP SVLKKPFSVI DGPPSSAAGN PGEIAKLFPN LFGQPSVSLL PGHTSGAALD HTLKVGVVLS GGQAPGGHNV
101: ISGIFDYLQE KTKNSTLYGF KGGPAGIMNC KYVELTADFV YPYRNQGGFD MICSGRDKIE SDEQFNQAAE TAKKLNLDGI VVIGGDDSNT NACLLAENFR
201: GKGLKTRVIG CPKTIDGDLK CKEVPTSFGF DTACKIYAEM IGNVMIDARS TGKYYHFVRL MGRAASHITL ECALQTHPNI TIIGEEVAAQ KQTLKSVTDY
301: IVGVICKRAK LGYNYGVILI PEGLIDFIPE VQQLIAELNE ILAHDVIDAA GSWKKKLQSQ SRDLFELLPQ AIQEQLLLER DPHGNVQVAK IETEKMLIQM
401: VEAELESKRK EGSYTKQFKG QSHFFGYEGR CGLPSNFDSN YCYALGYGAG ALLQSGKTGL ISSVGNLKAP VEDWTVGGTA LTSLMDVERR HGKFKPVIKK
501: AMVELEGAPF KKFASLREEW ALKNRYFSPG PLQFVGPTSN ETNHTLMLEL GAKA

Best Arabidopsis Sequence Match ( AT1G12000.1 )
(BLAST)

001: MAPALAVTRD LTAVGSPENA PAKGRASVYS EVQSSRINNT LPLPSVLKGA FKIVEGPASS AAGNPDEIAK LFPGLYGQPS VAVVPDQDAP SSAPKLKIGV
101: VLSGGQAPGG HNVISGLFDY LQERAKGSTF YGFKGGPAGI MKCKYVELNA EYIQPYRNQG GFDMICSGRD KIETPDQFKQ AEETAKKLDL DGLVVIGGDD
201: SNTNACLLAE NFRSKNLKTR VIGCPKTIDG DLKCKEVPTS FGFDTACKIY SEMIGNVMID ARSTGKYYHF VRLMGRAASH ITLECALQTH PNITIIGEEV
301: SAQKQTLKNV TDYMVDVICK RAELGYNYGV ILIPEGLIDF IPEVQELIAE LNEILANEVV DENGLWKKKL TEQSLKLFDL LPEAIQEQLM LERDPHGNVQ
401: VAKIETEKML IQMVETELEK RKQAGAYKGQ FMGQSHFFGY EGRCGLPTNF DATYCYALGY GAGVLLNSGK TGLISSVGNL AAPVEEWTVG GTALTALMDV
501: ERRHGKFKPV IKKAMVELEG APFKKFASLR EEWALKNRYI SPGPIQFTGP GSDSLSHTLL LELGAQ

Arabidopsis Description

PFP-BETA1Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W4M5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.