Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 3
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P20550_001 | Banana | cytosol | 70.37 | 15.5 |
| VIT_18s0122g00510.t01 | Wine grape | cytosol | 65.19 | 14.29 |
| GSMUA_Achr9P12330_001 | Banana | cytosol | 65.19 | 14.29 |
| KRH49514 | Soybean | cytosol, endoplasmic reticulum, nucleus | 63.7 | 13.94 |
| CDX96611 | Canola | cytosol | 61.48 | 13.88 |
| CDY33660 | Canola | cytosol | 61.48 | 13.88 |
| KRG89187 | Soybean | endoplasmic reticulum | 62.96 | 13.78 |
| PGSC0003DMT400025919 | Potato | cytosol | 62.22 | 13.64 |
| Solyc04g082880.2.1 | Tomato | cytosol, nucleus, plastid, unclear | 61.48 | 13.47 |
| Solyc12g095760.1.1 | Tomato | cytosol, extracellular, nucleus, unclear | 61.48 | 13.45 |
| PGSC0003DMT400075360 | Potato | cytosol | 61.48 | 13.45 |
| CDY67022 | Canola | cytosol | 61.48 | 13.41 |
| Bra025858.1-P | Field mustard | cytosol | 60.74 | 13.25 |
| CDY67203 | Canola | cytosol | 60.74 | 13.25 |
| AT1G20950.1 | Thale cress | cytosol | 60.0 | 13.19 |
| GSMUA_Achr3P11650_001 | Banana | cytosol | 59.26 | 12.95 |
| GSMUA_Achr1P06200_001 | Banana | cytosol | 58.52 | 12.8 |
| GSMUA_AchrUn_... | Banana | cytosol | 57.04 | 12.36 |
| GSMUA_Achr8P22590_001 | Banana | cytosol, plastid | 34.81 | 8.33 |
| GSMUA_Achr7P02210_001 | Banana | plastid | 34.81 | 8.33 |
| GSMUA_Achr3P08040_001 | Banana | cytosol, mitochondrion | 36.3 | 8.05 |
| GSMUA_AchrUn_... | Banana | cytosol | 0.0 | 0.0 |
Protein Annotations
| KEGG:00010+2.7.1.11 | KEGG:00030+2.7.1.11 | KEGG:00051+2.7.1.11 | KEGG:00052+2.7.1.11 | KEGG:00680+2.7.1.11 | Gene3D:3.40.50.450 |
| MapMan:50.2.7 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003872 | GO:GO:0005975 | GO:GO:0006091 |
| GO:GO:0006096 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0061615 | EnsemblPlantsGene:GSMUA_AchrUn_randomG12890_001 | EnsemblPlants:GSMUA_AchrUn_randomP12890_001 |
| EnsemblPlants:GSMUA_AchrUn_randomT12890_001 | UniProt:M0U8P8 | InterPro:PKF_sf | PANTHER:PTHR43650 | PANTHER:PTHR43650:SF2 | SUPFAM:SSF53784 |
| UniParc:UPI000294F48A | : | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG12890_001]
Coordinates
chrchrUn_random:-:62345958..62348171
Molecular Weight (calculated)
14521.8 Da
IEP (calculated)
8.429
GRAVY (calculated)
0.111
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVPFAGHHS CIQISCCRVG VVFCGRQSPG GHNVIWGLHS ALKSHNPKGT LLGFVGGTEG LFVKKTLDIT NDILSTYKTK VCGYDLLGRT KDQIRTSEQV
101: NAVMSTCQEL KLDGLVIIGG VTIQHRCCSA CGDIC
101: NAVMSTCQEL KLDGLVIIGG VTIQHRCCSA CGDIC
001: MDSDFGIPRE LSPLQQLRSQ YKPELPPCLQ GTTVRVELGD GTTVAEAADS HTMARAFPHT LGQPLAHFLR ETAQVPDAHI ITELPSVRVG IVFCGRQAPG
101: GHNVIWGLFE ALKVHNAKST LLGFLGGSEG LFAQKTLEIT DDILQTYKNQ GGYDLLGRTK DQIKTTEQVN AALKACTDLK LDGLVIIGGV ISNTDAAHLA
201: EFFAAAKCST KVVGVPVTTN GDLKNQFVEA NVGFDTICKV NSQLISNACT DALSAEKYYY FIRLMGRKHS HVALECTLQS HPNMVILGEE VAASKLTIFD
301: IAKQICDAVQ ARAVEDKNHG VILIPEGLIV SIPEVYALLK EIHGLLRQGV SADKISTQLS PWSSALFEFL PPFIKKQLLL HPESDDSAQL SQIETEKLLA
401: YLVETEMNKR LKEGTYKGKK FNAICHFFGY QARGSLPSKF DCDYAYVLGH ICYHILAAGL NGYMATVTNL KSPVNKWKCG ATPITAMMTV KHWSQDASYT
501: LTSIGRPAIH PAMVDLKGKA YDLLRQNAQK FLMEDLYRNP GPLQYDGPGA DAKAVSLCVE DQDYMGRIKK LQEYLDQVRT IVKPGCSQDV LKAALSVMAS
601: VTDVLTTISS NGGQ
101: GHNVIWGLFE ALKVHNAKST LLGFLGGSEG LFAQKTLEIT DDILQTYKNQ GGYDLLGRTK DQIKTTEQVN AALKACTDLK LDGLVIIGGV ISNTDAAHLA
201: EFFAAAKCST KVVGVPVTTN GDLKNQFVEA NVGFDTICKV NSQLISNACT DALSAEKYYY FIRLMGRKHS HVALECTLQS HPNMVILGEE VAASKLTIFD
301: IAKQICDAVQ ARAVEDKNHG VILIPEGLIV SIPEVYALLK EIHGLLRQGV SADKISTQLS PWSSALFEFL PPFIKKQLLL HPESDDSAQL SQIETEKLLA
401: YLVETEMNKR LKEGTYKGKK FNAICHFFGY QARGSLPSKF DCDYAYVLGH ICYHILAAGL NGYMATVTNL KSPVNKWKCG ATPITAMMTV KHWSQDASYT
501: LTSIGRPAIH PAMVDLKGKA YDLLRQNAQK FLMEDLYRNP GPLQYDGPGA DAKAVSLCVE DQDYMGRIKK LQEYLDQVRT IVKPGCSQDV LKAALSVMAS
601: VTDVLTTISS NGGQ
Arabidopsis Description
PFP-ALPHA1Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [Source:UniProtKB/TrEMBL;Acc:A0A178WMV9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.