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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • peroxisome 4
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
Plant-mPloc:peroxisome
PProwler:peroxisome
PTS1:peroxisome
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr1P04940_001
GSMUA_Achr2P16600_001
GSMUA_Achr2P21630_001
GSMUA_Achr3P25070_001
GSMUA_Achr4P01040_001
GSMUA_Achr4P08240_001
GSMUA_Achr4P15420_001
GSMUA_Achr6P06650_001
GSMUA_Achr6P12170_001
GSMUA_Achr7P10770_001
GSMUA_Achr7P11190_001
GSMUA_Achr7P13640_001
GSMUA_Achr7P14150_001
GSMUA_Achr7P18630_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G65940.1 GSMUA_Achr2P21630_001 AT1G14830.1 21798944
AT5G65940.1 GSMUA_Achr7P11190_001 AT1G14830.1 21798944
AT5G65940.1 GSMUA_Achr10P... AT2G42490.1 21798944
AT5G65940.1 GSMUA_Achr6P06650_001 AT2G42490.1 21798944
AT5G65940.1 GSMUA_Achr6P12170_001 AT2G42490.1 21798944
AT5G65940.1 GSMUA_Achr10P... AT2G42790.1 21798944
AT5G65940.1 GSMUA_Achr10P... AT3G12110.1 21798944
AT5G65940.1 GSMUA_Achr7P18630_001 AT3G12110.1 21798944
AT5G65940.1 GSMUA_AchrUn_... AT3G12110.1 21798944
AT5G65940.1 GSMUA_Achr10P... AT4G01090.1 21798944
AT5G65940.1 GSMUA_Achr10P... AT4G01090.1 21798944
AT5G65940.1 GSMUA_Achr10P... AT4G01090.1 21798944
AT5G65940.1 GSMUA_Achr3P25070_001 AT4G01090.1 21798944
AT5G65940.1 GSMUA_Achr7P14150_001 AT4G01090.1 21798944
AT5G65940.1 GSMUA_Achr1P04940_001 AT5G56630.1 21798944
AT5G65940.1 GSMUA_Achr2P16600_001 AT5G56630.1 21798944
AT5G65940.1 GSMUA_Achr4P01040_001 AT5G56630.1 21798944
AT5G65940.1 GSMUA_Achr4P08240_001 AT5G56630.1 21798944
AT5G65940.1 GSMUA_Achr4P15420_001 AT5G56630.1 21798944
AT5G65940.1 GSMUA_Achr7P10770_001 AT5G56630.1 21798944
AT5G65940.1 GSMUA_Achr7P13640_001 AT5G56630.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P13900_001 Banana cytosol 67.85 85.9
GSMUA_Achr8P14800_001 Banana cytosol 71.65 71.28
PGSC0003DMT400004567 Potato extracellular 23.29 69.7
TraesCS1B01G206000.1 Wheat cytosol 62.28 64.57
TraesCS1D01G194800.2 Wheat cytosol 62.03 64.3
PGSC0003DMT400066409 Potato cytosol 22.53 64.03
EER91893 Sorghum cytosol 62.53 63.99
Solyc01g080930.2.1 Tomato cytosol 62.03 63.97
CDY57769 Canola peroxisome 59.75 63.27
AT5G65940.1 Thale cress peroxisome 60.51 63.23
AT2G30660.1 Thale cress peroxisome 60.51 63.23
VIT_15s0045g01170.t01 Wine grape cytosol 23.29 63.01
TraesCS1A01G190800.1 Wheat plastid 62.03 62.5
Bra031802.1-P Field mustard cytosol 59.24 62.23
CDY55104 Canola cytosol 59.24 62.23
PGSC0003DMT400000043 Potato cytosol, mitochondrion, peroxisome 41.77 62.03
KRH07311 Soybean nucleus 60.51 61.76
Zm00001d021132_P004 Maize extracellular 63.04 61.63
Bra018392.1-P Field mustard cytosol 57.47 61.02
PGSC0003DMT400000054 Potato cytosol 59.24 60.94
VIT_09s0002g07160.t01 Wine grape mitochondrion, peroxisome, plastid 56.71 60.54
Solyc01g094090.2.1 Tomato cytosol 50.13 60.18
Zm00001d007726_P001 Maize peroxisome 37.22 60.0
Solyc01g108800.2.1 Tomato cytoskeleton, cytosol, peroxisome 57.47 59.89
AT2G30650.1 Thale cress peroxisome 56.96 59.52
KXG29172 Sorghum peroxisome 57.97 59.17
Zm00001d023779_P001 Maize extracellular 57.72 59.07
PGSC0003DMT400066424 Potato cytosol, nucleus, plastid 10.13 58.82
CDX97894 Canola peroxisome 57.72 58.76
GSMUA_Achr5P13890_001 Banana nucleus 23.8 58.75
CDY45442 Canola mitochondrion 49.11 58.61
CDY31775 Canola peroxisome 56.71 58.49
Bra018395.1-P Field mustard cytosol 54.94 58.18
HORVU1Hr1G049960.6 Barley mitochondrion 61.52 57.58
CDY62818 Canola peroxisome 58.23 57.36
Bra039968.1-P Field mustard peroxisome 57.47 56.89
CDY31769 Canola peroxisome 57.72 56.86
Zm00001d007746_P002 Maize peroxisome 27.34 56.84
OQU84058 Sorghum mitochondrion 58.99 56.83
PGSC0003DMT400066414 Potato cytosol 24.56 56.73
PGSC0003DMT400066419 Potato cytosol 34.43 56.67
PGSC0003DMT400066411 Potato nucleus 20.76 56.16
Bra039975.1-P Field mustard peroxisome 54.18 55.58
PGSC0003DMT400004521 Potato cytosol 31.9 53.85
CDY45439 Canola plastid 53.67 53.67
PGSC0003DMT400004585 Potato extracellular 35.7 52.81
CDY71268 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole 19.49 51.68
Zm00001d007740_P001 Maize peroxisome 48.1 50.4
Zm00001d007728_P001 Maize cytosol 17.47 48.59
Os12t0264500-02 Rice endoplasmic reticulum 62.28 47.95
GSMUA_Achr4P17090_001 Banana cytosol, nucleus, peroxisome 24.3 47.52
Zm00001d007732_P002 Maize extracellular 32.91 45.61
VIT_15s0045g01190.t01 Wine grape cytosol, nucleus, peroxisome 43.29 43.73
GSMUA_Achr4P27030_001 Banana mitochondrion 44.56 43.46
GSMUA_Achr4P17080_001 Banana mitochondrion 18.48 42.2
GSMUA_Achr4P30390_001 Banana mitochondrion 44.81 40.32
GSMUA_Achr7P08560_001 Banana cytosol 32.41 33.77
GSMUA_Achr9P06670_001 Banana plastid 40.25 33.69
Solyc01g108790.1.1 Tomato nucleus 14.94 33.52
GSMUA_Achr6P00740_001 Banana cytosol 31.65 33.16
GSMUA_Achr7P13260_001 Banana cytosol 31.14 32.89
Protein Annotations
EnsemblPlants:GSMUA_Achr5P13870_001EnsemblPlants:GSMUA_Achr5T13870_001EnsemblPlantsGene:GSMUA_Achr5G13870_001Gene3D:3.90.226.40GO:GO:0003674GO:GO:0003824
GO:GO:0003860GO:GO:0016787InterPro:ClpP/crotonase-like_dom_sfInterPro:HIBYL-CoA-HPANTHER:PTHR43176PANTHER:PTHR43176:SF6
PFAM:PF16113SEG:segSUPFAM:SSF52096UniParc:UPI000295AAB1UniProt:M0SYB6MapMan:4.2.7.4
MapMan:4.2.7.6.1:::::
Description
3-hydroxyisobutyryl-CoA hydrolase 1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G13870_001]
Coordinates
chr5:-:9964908..9977978
Molecular Weight (calculated)
43694.0 Da
IEP (calculated)
5.882
GRAVY (calculated)
0.053
Length
395 amino acids
Sequence
(BLAST)
001: MAASSPNADN DGTSDQVLVE DCRFTRILTL NRPQQLNALS TPMIMKLLKL FVAYEKDSDV KLLIVKGNGR AFSAGGDVAA VARSVAQGQW ALGTEFLRNQ
101: YTLNYIIATY GKPQVSILNG IVMGGGAGVS IHGRFRVVTE KTVFAMPETS LGFFPDIGAS YFLSRLPGFF GEYLGLTGAR LDGAEMLACG LATHFVPSMN
201: LAYLEDLLTK VETSDPFVIC ASIDQFSQMV PLKASSAYNS CLILQLMQIL DIIDKCFSKE TVQEIISALE KESASMADEW IVVAIQALKK ASPISLKVTL
301: RSIREGRLQG VDRCLTKEFR LCCHILRLEA SKDFLEGFRA ILVDKDRNPK WEPPRLDLVD SKVLDQYFAE VDDANWEDLK LPSRRNLATN YVSKM
Best Arabidopsis Sequence Match ( AT5G65940.4 )
(BLAST)
001: MAVEMASQSQ VLVEEKSSVR ILTLNRPKQL NALSFHMISR LLQLFLAFEE DPSVKLVILK GHGRAFCAGG DVAAVVRDIN QGNWRLGANY FSSEYMLNYV
101: MATYSKAQVS ILNGIVMGGG AGVSVHGRFR IATENTVFAM PETALGLFPD VGASYFLSRL PGFFGEYVGL TGARLDGAEM LACGLATHFV PSTRLTALEA
201: DLCRINSNDP TFASTILDAY TQHPRLKQQS AYRRLDVIDR CFSRRTVEEI ISALEREATQ EADGWISATI QALKKGSPAS LKISLRSIRE GRLQGVGQCL
301: IREYRMVCHV MKGEISKDFV EGCRAILVDK DKNPKWEPRR LEDMKDSMVE QYFERVERED DLKLPPRNNL PALGIAKL
Arabidopsis Description
CHY13-hydroxyisobutyryl-CoA hydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKJ1]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.