Factsheet for GSMUA_Achr4P27030_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P30390_001	Banana	mitochondrion	83.21	76.77
TraesCS1B01G224200.1	Wheat	mitochondrion	75.56	75.0
TraesCS1D01G213600.1	Wheat	mitochondrion	75.31	74.75
TraesCS1A01G210300.2	Wheat	mitochondrion	75.31	74.75
EER91964	Sorghum	mitochondrion	73.33	73.15
Zm00001d029860_P001	Maize	plasma membrane	72.59	72.41
Os10t0552900-01	Rice	mitochondrion	73.33	72.26
VIT_04s0008g06610.t01	Wine grape	mitochondrion	66.42	66.09
Solyc10g085630.1.1	Tomato	mitochondrion	62.96	62.2
Bra010219.1-P	Field mustard	mitochondrion	61.98	61.22
CDY23311	Canola	mitochondrion	61.98	61.22
KRH05370	Soybean	mitochondrion	61.48	61.18
CDY39880	Canola	mitochondrion	61.73	60.98
AT4G31810.1	Thale cress	mitochondrion	61.48	60.88
KRH15650	Soybean	mitochondrion	60.99	60.69
PGSC0003DMT400043000	Potato	cytosol	26.42	54.87
GSMUA_Achr5P13900_001	Banana	cytosol	34.81	45.19
GSMUA_Achr5P13870_001	Banana	cytosol	43.46	44.56
GSMUA_Achr8P14800_001	Banana	cytosol	41.98	42.82
GSMUA_Achr4P17090_001	Banana	cytosol, nucleus, peroxisome	20.74	41.58
GSMUA_Achr5P13890_001	Banana	nucleus	13.33	33.75
GSMUA_Achr7P08560_001	Banana	cytosol	31.36	33.51
GSMUA_Achr4P17080_001	Banana	mitochondrion	14.07	32.95
GSMUA_Achr6P00740_001	Banana	cytosol	30.12	32.36
GSMUA_Achr7P13260_001	Banana	cytosol	29.63	32.09
GSMUA_Achr9P06670_001	Banana	plastid	37.28	31.99

Protein Annotations

EnsemblPlants:GSMUA_Achr4P27030_001	EnsemblPlants:GSMUA_Achr4T27030_001	EnsemblPlantsGene:GSMUA_Achr4G27030_001	Gene3D:3.90.226.40	GO:GO:0003674	GO:GO:0003824
GO:GO:0003860	GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	ncoils:Coil	PANTHER:PTHR43176
PANTHER:PTHR43176:SF8	PFAM:PF16113	SUPFAM:SSF52096	UniParc:UPI000294DB59	UniProt:M0SSG5	MapMan:50.3.1

Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr4G27030_001]

Coordinates

chr4:-:26026971..26033254

Molecular Weight (calculated)

45134.2 Da

IEP (calculated)

6.513

GRAVY (calculated)

-0.152

Length

405 amino acids

Sequence
(BLAST)

001: MHKFRGLASG RRSLPDIRCA LSSFSTTTRP LSAHDDQPQN EVLVEGKASA RAAILNRPSA LNALTTNMAV RLKKFYETWE DNPDIGFVMM KGSGRAFCAG
101: GDVVALHRLL NEGKMEDCKD FFRNLYTFIY VLGTYLKPHV AILDGVTMGG GAGVSVPGTF RIATDKTIFA TPEVHIGFHP DAGASFYLSR LTGYIGEYLA
201: LTGERLNGVD MLAVGLATHF SLRARLDWID ERLAKLITDD PSVIDSTLAQ YGDLVYPDKT SIVHRLEVID KCFGHETVEE ILDALEVEVA RSNQDWCASA
301: LKKLKEASPL SLKVSLRSIR EGRFQTLDEC LVREYRMSLH GISKPVSHDF CEGVRARLVE KDLAPKWDPP TLEKVSKDMV DYYFSPLGEF EPELKLPTHL
401: REAFI

Best Arabidopsis Sequence Match ( AT4G31810.1 )
(BLAST)

001: MQTVKALRRV SEPLQWVRSV SYGRRFSALP NYSASDADFE DQVLVEGKAK SRAAILNNPS SLNALSAPMV GRLKRLYESW EENPAISFVL MKGSGKTFCS
101: GADVLSLYHS INEGNTEESK LFFENLYKFV YLQGTYLKPN IAIMDGVTMG CGGGISLPGM FRVATDKTVL AHPEVQIGFH PDAGASYYLS RLPGYLGEYL
201: ALTGQKLNGV EMIACGLATH YCLNARLPLI EERIGKLLTD DPAVIEDSLA QYGDLVYPDS SSVLHKIELI DKYFGLDTVE EIIEAMENEA ANSCNEWCKK
301: TLKQIKEASP LSLKITLQSI REGRFQTLDQ CLTHEYRISI CGVSKVVSGD FCEGIRARLV DKDFAPKWDP PRLEDVSKDM VDCYFTPASE LDDSDSELKL
401: PTAQREPYF

Arabidopsis Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.