CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39880	Canola	mitochondrion	99.02	99.02
Bra010219.1-P	Field mustard	mitochondrion	98.78	98.78
AT4G31810.1	Thale cress	mitochondrion	88.54	88.75
VIT_04s0008g06610.t01	Wine grape	mitochondrion	68.29	68.8
KRH05370	Soybean	mitochondrion	67.32	67.81
KRH15650	Soybean	mitochondrion	66.83	67.32
Solyc10g085630.1.1	Tomato	mitochondrion	65.37	65.37
GSMUA_Achr4P27030_001	Banana	mitochondrion	61.22	61.98
TraesCS1D01G213600.1	Wheat	mitochondrion	58.54	58.82
TraesCS1B01G224200.1	Wheat	mitochondrion	58.54	58.82
TraesCS1A01G210300.2	Wheat	mitochondrion	58.54	58.82
EER91964	Sorghum	mitochondrion	58.05	58.62
Zm00001d029860_P001	Maize	plasma membrane	57.8	58.37
Os10t0552900-01	Rice	mitochondrion	57.07	56.93
GSMUA_Achr4P30390_001	Banana	mitochondrion	60.73	56.72
CDX67831	Canola	mitochondrion	51.22	52.24
CDX98420	Canola	mitochondrion	51.22	52.24
PGSC0003DMT400043000	Potato	cytosol	24.39	51.28
CDY72221	Canola	mitochondrion	25.12	49.52
CDY57769	Canola	peroxisome	40.73	44.77
CDY71268	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	15.85	43.62
CDY55104	Canola	cytosol	40.0	43.62
CDY45442	Canola	mitochondrion	34.15	42.3
CDY45439	Canola	plastid	39.27	40.76
CDY31775	Canola	peroxisome	38.05	40.73
CDX97894	Canola	peroxisome	38.54	40.72
CDY31769	Canola	peroxisome	39.76	40.65
CDY62818	Canola	peroxisome	39.02	39.9
CDY15581	Canola	cytosol	26.1	39.19
CDX86518	Canola	cytosol	36.34	38.9
CDY15584	Canola	cytosol	35.85	38.79
CDY49269	Canola	extracellular, mitochondrion, nucleus, plastid	19.76	36.0
CDY15583	Canola	cytosol	31.95	35.5
CDX86519	Canola	extracellular	16.59	34.34
CDY64934	Canola	cytosol	30.73	33.07
CDY01126	Canola	mitochondrion, plastid	30.98	30.09
CDX94817	Canola	mitochondrion, plastid	30.49	29.55
CDX93011	Canola	plastid	30.24	29.31

Protein Annotations

EnsemblPlants:CDY23311	EnsemblPlantsGene:GSBRNA2T00021891001	Gene3D:3.90.226.40	GO:A0A078GD49	GO:GO:0003674	GO:GO:0003824
GO:GO:0003860	GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	ncoils:Coil	PANTHER:PTHR43176
PANTHER:PTHR43176:SF8	PFAM:PF16113	ProteinID:CDY23311	ProteinID:CDY23311.1	SUPFAM:SSF52096	UniParc:UPI0004EE33C0
UniProt:A0A078GD49	MapMan:50.3.1	:	:	:	:

Description

BnaA08g12350DBnaA08g12350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GD49]

Coordinates

chrLK032142:-:428422..431516

Molecular Weight (calculated)

45494.3 Da

IEP (calculated)

5.339

GRAVY (calculated)

-0.256

Length

410 amino acids

Sequence
(BLAST)

001: MQTVRALRRV TKPSQWVRSV PQGKRSFSAL PNYSASDADV QDQVSVEGKA KSRAAILDRP SSLNALSAPM VGRLKRLYES WEENPAISFV LMKGSGKTFC
101: SGADVLPLYH SINEGNTEEC KHFFGSLYNF VYLQGTYLKP NIAIMDGVTM GCGGGISIPG MFRVATDKTV LAHPEVQIGF HPDAGASYYL SRLPGYLGEY
201: LALTGQKLDG VEMIACGLAT HFCLHSRLGM VEERIGKLLT DDPTVIEASL AQYSDLVYPD NTSVLHKIEM IDRYFGLDTV EEIIEAMENE VADSGNEWCK
301: KTLKQVKEAS PLSLKITLQS IREGRFQTLD QCLTREYRIS LCGVSKTVSG DFCEGIRARL VDKDFAPKWD PPRLENVSKD MVDCYFSPAT DADDSESELK
401: LPTAQREPYF

Best Arabidopsis Sequence Match ( AT4G31810.1 )
(BLAST)

001: MQTVKALRRV SEPLQWVRSV SYGRRFSALP NYSASDADFE DQVLVEGKAK SRAAILNNPS SLNALSAPMV GRLKRLYESW EENPAISFVL MKGSGKTFCS
101: GADVLSLYHS INEGNTEESK LFFENLYKFV YLQGTYLKPN IAIMDGVTMG CGGGISLPGM FRVATDKTVL AHPEVQIGFH PDAGASYYLS RLPGYLGEYL
201: ALTGQKLNGV EMIACGLATH YCLNARLPLI EERIGKLLTD DPAVIEDSLA QYGDLVYPDS SSVLHKIELI DKYFGLDTVE EIIEAMENEA ANSCNEWCKK
301: TLKQIKEASP LSLKITLQSI REGRFQTLDQ CLTHEYRISI CGVSKVVSGD FCEGIRARLV DKDFAPKWDP PRLEDVSKDM VDCYFTPASE LDDSDSELKL
401: PTAQREPYF

Arabidopsis Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.