CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029860_P001	Maize	plasma membrane	95.81	95.81
TraesCS1D01G213600.1	Wheat	mitochondrion	87.44	87.01
TraesCS1B01G224200.1	Wheat	mitochondrion	87.19	86.76
TraesCS1A01G210300.2	Wheat	mitochondrion	86.95	86.52
Os10t0552900-01	Rice	mitochondrion	86.21	85.16
GSMUA_Achr4P27030_001	Banana	mitochondrion	73.15	73.33
GSMUA_Achr4P30390_001	Banana	mitochondrion	73.4	67.88
VIT_04s0008g06610.t01	Wine grape	mitochondrion	64.29	64.13
Solyc10g085630.1.1	Tomato	mitochondrion	62.81	62.2
AT4G31810.1	Thale cress	mitochondrion	60.1	59.66
KRH05370	Soybean	mitochondrion	59.36	59.21
Bra010219.1-P	Field mustard	mitochondrion	59.11	58.54
CDY23311	Canola	mitochondrion	58.62	58.05
CDY39880	Canola	mitochondrion	58.37	57.8
KRH15650	Soybean	mitochondrion	57.64	57.49
PGSC0003DMT400043000	Potato	cytosol	26.11	54.36
EER91893	Sorghum	cytosol	41.87	44.04
KXG29172	Sorghum	peroxisome	39.9	41.86
OQU84058	Sorghum	mitochondrion	41.38	40.98
EES03617	Sorghum	cytosol	36.7	38.9
KXG20277	Sorghum	plastid	29.56	28.1

Protein Annotations

Gene3D:3.90.226.40	MapMan:50.3.1	EntrezGene:8058111	UniProt:C5WSJ3	InterPro:ClpP/crotonase-like_dom_sf	ncoils:Coil
EnsemblPlants:EER91964	ProteinID:EER91964	ProteinID:EER91964.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0003860
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0016787
InterPro:HIBYL-CoA-H	PFAM:PF16113	PANTHER:PTHR43176	PANTHER:PTHR43176:SF8	EnsemblPlantsGene:SORBI_3001G304000	SUPFAM:SSF52096
unigene:Sbi.4943	UniParc:UPI0001A82528	RefSeq:XP_002464966.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:58765591..58771906

Molecular Weight (calculated)

44737.5 Da

IEP (calculated)

5.112

GRAVY (calculated)

-0.122

Length

406 amino acids

Sequence
(BLAST)

001: MPRLAAAAAV SRRAGEALRR GALGRLRLLS SLQPSNAASS DEVLVEGKAT ARAAVLNRPG YLNALTTTMG ARLNKFYESW EDNPDIGFVM MKGSGRAFCA
101: GGDVVRLREL ISEGKLEECK DFFKTLYMFI YFLGTYLKPH IAILDGVTMG GGGGVSIPGT FRIATDRTVF ATPEVHIGFH PDAAASFYLS HLTGHVGEYV
201: ALTGEKLNGT DMIALGLATH YSMSGHLDLI DERLAKLVTD DPSVIDSSLA QYGDMVYPDK ESIVHRLEVI DKCFSHDTVE EIVDALESEA ASSNEEWCTL
301: ALKRLKEASP LALKVSLRSI REGRYQTLDE CLVREYRMSM NGISKQFSHE FCEGVRARLV EKDFTPKWDP PALEYVTNDM VDAYFAPLGD LEPELKLPTE
401: SREAFV

Best Arabidopsis Sequence Match ( AT4G31810.1 )
(BLAST)

001: MQTVKALRRV SEPLQWVRSV SYGRRFSALP NYSASDADFE DQVLVEGKAK SRAAILNNPS SLNALSAPMV GRLKRLYESW EENPAISFVL MKGSGKTFCS
101: GADVLSLYHS INEGNTEESK LFFENLYKFV YLQGTYLKPN IAIMDGVTMG CGGGISLPGM FRVATDKTVL AHPEVQIGFH PDAGASYYLS RLPGYLGEYL
201: ALTGQKLNGV EMIACGLATH YCLNARLPLI EERIGKLLTD DPAVIEDSLA QYGDLVYPDS SSVLHKIELI DKYFGLDTVE EIIEAMENEA ANSCNEWCKK
301: TLKQIKEASP LSLKITLQSI REGRFQTLDQ CLTHEYRISI CGVSKVVSGD FCEGIRARLV DKDFAPKWDP PRLEDVSKDM VDCYFTPASE LDDSDSELKL
401: PTAQREPYF

Arabidopsis Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.