Factsheet for Zm00001d029860_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91964	Sorghum	mitochondrion	95.81	95.81
TraesCS1D01G213600.1	Wheat	mitochondrion	86.7	86.27
TraesCS1B01G224200.1	Wheat	mitochondrion	86.7	86.27
TraesCS1A01G210300.2	Wheat	mitochondrion	86.21	85.78
Os10t0552900-01	Rice	mitochondrion	84.98	83.94
GSMUA_Achr4P27030_001	Banana	mitochondrion	72.41	72.59
GSMUA_Achr4P30390_001	Banana	mitochondrion	72.91	67.43
VIT_04s0008g06610.t01	Wine grape	mitochondrion	64.53	64.37
Solyc10g085630.1.1	Tomato	mitochondrion	61.82	61.22
KRH05370	Soybean	mitochondrion	59.61	59.46
AT4G31810.1	Thale cress	mitochondrion	59.85	59.41
Bra010219.1-P	Field mustard	mitochondrion	58.87	58.29
CDY23311	Canola	mitochondrion	58.37	57.8
KRH15650	Soybean	mitochondrion	57.88	57.74
CDY39880	Canola	mitochondrion	58.13	57.56
PGSC0003DMT400043000	Potato	cytosol	26.85	55.9
Zm00001d007746_P002	Maize	peroxisome	20.94	44.74
Zm00001d007726_P001	Maize	peroxisome	26.6	44.08
Zm00001d023779_P001	Maize	extracellular	41.13	43.26
Zm00001d021132_P004	Maize	extracellular	42.36	42.57
Zm00001d043490_P001	Maize	cytosol, extracellular	37.19	39.32
Zm00001d007732_P002	Maize	extracellular	25.86	36.84
Zm00001d007740_P001	Maize	peroxisome	33.74	36.34
Zm00001d007728_P001	Maize	cytosol	12.07	34.51
Zm00001d046456_P009	Maize	plastid	27.34	24.83

Protein Annotations

EntrezGene:100382650	Gene3D:3.90.226.40	MapMan:50.3.1	EMBL:BT065019	UniProt:C0P9Q0	InterPro:ClpP/crotonase-like_dom_sf
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0003860	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0016787	InterPro:HIBYL-CoA-H	ProteinID:ONL99738.1
PFAM:PF16113	PANTHER:PTHR43176	PANTHER:PTHR43176:SF8	SUPFAM:SSF52096	UniParc:UPI000194B24F	EnsemblPlantsGene:Zm00001d029860
EnsemblPlants:Zm00001d029860_P001	EnsemblPlants:Zm00001d029860_T001	SEG:seg	:	:	:

Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 2 mitochondrial

Coordinates

chr1:-:90857432..90869865

Molecular Weight (calculated)

44707.5 Da

IEP (calculated)

5.319

GRAVY (calculated)

-0.098

Length

406 amino acids

Sequence
(BLAST)

001: MPRLAAAAAV SRRAGEALRR GAFGGLRPLS SLQPLNAASS DEVLVEGKTS ARAAVLNRPG YLNALTTTMG ARLNKFYQSW EDNPDIGFVM MKGSGRAFCA
101: GGDVVRLHEL ISEGKLEECK DFFKTLYMFI YFLGTYLKPH VAILDGITMG GGGGVSIPGT FRVATDRTVF ATPEVHIGFH PDAAASFYLS HLTGHVGEYV
201: ALTGEKLNGT DMIALGLATH YFMSGHLDLI DERLAKLVTD DPSVIDSSLA QYGDMVYPDK KSIVHRLEVI DKCFSHDTVE EIVDALESEA ASSNEEWCIL
301: ALKRLKEASP LALKVSLRSI REGRYQTLDE CLVREYRMSM NGISKQFSHE FCEGVRARLV DKDFTPKWDP PALEYVTNDM VDAYFAPLGD SEPELKLPIE
401: SREAFV

Best Arabidopsis Sequence Match ( AT4G31810.1 )
(BLAST)

001: MQTVKALRRV SEPLQWVRSV SYGRRFSALP NYSASDADFE DQVLVEGKAK SRAAILNNPS SLNALSAPMV GRLKRLYESW EENPAISFVL MKGSGKTFCS
101: GADVLSLYHS INEGNTEESK LFFENLYKFV YLQGTYLKPN IAIMDGVTMG CGGGISLPGM FRVATDKTVL AHPEVQIGFH PDAGASYYLS RLPGYLGEYL
201: ALTGQKLNGV EMIACGLATH YCLNARLPLI EERIGKLLTD DPAVIEDSLA QYGDLVYPDS SSVLHKIELI DKYFGLDTVE EIIEAMENEA ANSCNEWCKK
301: TLKQIKEASP LSLKITLQSI REGRFQTLDQ CLTHEYRISI CGVSKVVSGD FCEGIRARLV DKDFAPKWDP PRLEDVSKDM VDCYFTPASE LDDSDSELKL
401: PTAQREPYF

Arabidopsis Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.