Factsheet for Zm00001d007732_P002

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	peroxisome, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003309_P002
Zm00001d009716_P001
Zm00001d011373_P002
Zm00001d013426_P002
Zm00001d016081_P002
Zm00001d016248_P001
Zm00001d033751_P003
Zm00001d038775_P002
Zm00001d043563_P002
Zm00001d044191_P004
Zm00001d046072_P001
Zm00001d053382_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G65940.1	Zm00001d013426_P002	AT1G14830.1	21798944
AT5G65940.1	Zm00001d033751_P003	AT1G14830.1	21798944
AT5G65940.1	Zm00001d003309_P002	AT2G42490.1	21798944
AT5G65940.1	Zm00001d016248_P001	AT2G42790.1	21798944
AT5G65940.1	Zm00001d009716_P001	AT4G01090.1	21798944
AT5G65940.1	Zm00001d011373_P002	AT4G01090.1	21798944
AT5G65940.1	Zm00001d016081_P002	AT4G01090.1	21798944
AT5G65940.1	Zm00001d044191_P004	AT4G01090.1	21798944
AT5G65940.1	Zm00001d046072_P001	AT4G01090.1	21798944
AT5G65940.1	Zm00001d053382_P002	AT4G01090.1	21798944
AT5G65940.1	Zm00001d038775_P002	AT5G56630.1	21798944
AT5G65940.1	Zm00001d043563_P002	AT5G56630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007740_P001	Maize	peroxisome	89.47	67.64
Zm00001d007746_P002	Maize	peroxisome	41.75	62.63
Zm00001d007726_P001	Maize	peroxisome	50.53	58.78
PGSC0003DMT400066409	Potato	cytosol	27.37	56.12
PGSC0003DMT400004567	Potato	extracellular	24.21	52.27
PGSC0003DMT400066411	Potato	nucleus	22.11	43.15
CDY45442	Canola	mitochondrion	49.82	42.9
TraesCS1B01G206000.1	Wheat	cytosol	56.49	42.26
Zm00001d021132_P004	Maize	extracellular	59.3	41.83
CDY71268	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	21.75	41.61
TraesCS1D01G194800.2	Wheat	cytosol	55.44	41.47
KXG29172	Sorghum	peroxisome	55.79	41.09
TraesCS1A01G190800.1	Wheat	plastid	56.49	41.07
PGSC0003DMT400000043	Potato	cytosol, mitochondrion, peroxisome	38.25	40.98
OQU84058	Sorghum	mitochondrion	58.6	40.73
Zm00001d023779_P001	Maize	extracellular	55.09	40.67
VIT_09s0002g07160.t01	Wine grape	mitochondrion, peroxisome, plastid	49.47	38.11
Bra018392.1-P	Field mustard	cytosol	49.47	37.9
HORVU1Hr1G049960.6	Barley	mitochondrion	55.44	37.44
Solyc01g080930.2.1	Tomato	cytosol	50.18	37.34
CDY57769	Canola	peroxisome	48.77	37.27
Solyc01g094090.2.1	Tomato	cytosol	42.81	37.08
PGSC0003DMT400066414	Potato	cytosol	22.11	36.84
AT2G30650.1	Thale cress	peroxisome	48.77	36.77
AT2G30660.1	Thale cress	peroxisome	48.77	36.77
AT5G65940.1	Thale cress	peroxisome	48.77	36.77
PGSC0003DMT400004521	Potato	cytosol	30.18	36.75
CDY55104	Canola	cytosol	48.42	36.7
Bra031802.1-P	Field mustard	cytosol	48.42	36.7
Solyc01g108800.2.1	Tomato	cytoskeleton, cytosol, peroxisome	48.42	36.41
KRH07311	Soybean	nucleus	48.77	35.92
PGSC0003DMT400004585	Potato	extracellular	33.33	35.58
GSMUA_Achr5P13900_001	Banana	cytosol	38.95	35.58
CDY31775	Canola	peroxisome	47.37	35.25
Bra039975.1-P	Field mustard	peroxisome	47.02	34.81
Bra018395.1-P	Field mustard	cytosol	44.91	34.32
CDX97894	Canola	peroxisome	46.67	34.28
CDY31769	Canola	peroxisome	48.07	34.16
CDY62818	Canola	peroxisome	48.07	34.16
Bra039968.1-P	Field mustard	peroxisome	47.72	34.09
PGSC0003DMT400000054	Potato	cytosol	45.61	33.85
GSMUA_Achr8P14800_001	Banana	cytosol	47.02	33.75
CDY45439	Canola	plastid	46.32	33.42
GSMUA_Achr5P13870_001	Banana	cytosol	45.61	32.91
VIT_15s0045g01190.t01	Wine grape	cytosol, nucleus, peroxisome	44.56	32.48
PGSC0003DMT400066419	Potato	cytosol	26.32	31.25
Os12t0264500-02	Rice	endoplasmic reticulum	54.74	30.41
Zm00001d029860_P001	Maize	plasma membrane	36.84	25.86
Zm00001d043490_P001	Maize	cytosol, extracellular	33.33	24.74
PGSC0003DMT400066424	Potato	cytosol, nucleus, plastid	5.26	22.06
Zm00001d007728_P001	Maize	cytosol	9.47	19.01
GSMUA_Achr5P13890_001	Banana	nucleus	10.53	18.75
VIT_15s0045g01170.t01	Wine grape	cytosol	9.12	17.81
Solyc01g108790.1.1	Tomato	nucleus	10.18	16.48
Zm00001d046456_P009	Maize	plastid	22.46	14.32

Protein Annotations

EnsemblPlants:Zm00001d007732_P002	EnsemblPlants:Zm00001d007732_T002	EnsemblPlantsGene:Zm00001d007732	Gene3D:3.90.226.40	GO:GO:0003674	GO:GO:0003824
GO:GO:0003860	GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176	PANTHER:PTHR43176:SF6
PFAM:PF16113	ProteinID:ONM27482.1	SignalP:SignalP-noTM	SUPFAM:SSF52096	UniParc:UPI00084320A9	UniProt:A0A1D6F8H9
MapMan:50.3.1	:	:	:	:	:

Description

3-hydroxyisobutyryl-CoA hydrolase 1

Coordinates

chr2:-:238320508..238323760

Molecular Weight (calculated)

32101.3 Da

IEP (calculated)

8.556

GRAVY (calculated)

0.262

Length

285 amino acids

Sequence
(BLAST)

001: MFFIEVSLLT GIVMGGGAGV SLHGKFRVAT NNTVFAMPET SLGLFPDVGA SYFLARLPGF YGEYVALVGA RLDGAEMLAC GLATHFVPSN VRAFLINSKT
101: YVWFTISLFF HSLVHLRLEI INKCFSKRTV EEIISSLEEV ASNSASKWVA QTIKYLKKAS PTSLKITLRS IREGRTQTVG ECLQREYRMV CHVVRGDFSR
201: DIFEVIKHGH HQHFALYFVV IVHQYDGGLF WGACSGCLQG WNKCMMMQLK SISLGLMIQS GKIWTYLSCI QMEELWSPSF EWSLY

Best Arabidopsis Sequence Match ( AT2G30660.2 )
(BLAST)

001: MISRLLQLFR AYEEDPSVKL VILKGQGRAF CAGGDVPPVV QNMVQGKWRL GADFFRDQYT LNYVMATYSK PQVSILNGIV MGAGAGVSIH GRFRIATENT
101: VFAMPETSLG LFPDVGASYF LSRLPGFFGE YVGLTGARLD GAELLACGLA THFVPSTRLT ALETDLCKVG SSDPSFVSTI LDAYTQHPHL KQKSAYHRLD
201: VIDRCFSKRT MEEIISALER ETTQELDDWS LTTIRALKKS SPSSLKISLR SIREGRLQGV GHCLTREYRM VCHVMKGDLS KDLVEGCRAI LIDKDRNPKW
301: EPRRLEDMKD SMVDQFFERV EEEERWEDLK LSPRNNLHAL RIAAKL

Arabidopsis Description

Probable 3-hydroxyisobutyryl-CoA hydrolase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NMB0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.