Factsheet for AT2G30660.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 1
mitochondrion 2
peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G65940.1	Thale cress	peroxisome	83.6	83.6
AT2G30650.1	Thale cress	peroxisome	80.69	80.69
Bra018392.1-P	Field mustard	cytosol	76.72	77.96
CDX97894	Canola	peroxisome	78.31	76.29
CDY31775	Canola	peroxisome	77.25	76.24
Bra018395.1-P	Field mustard	cytosol	74.87	75.87
CDY62818	Canola	peroxisome	80.42	75.81
Bra039968.1-P	Field mustard	peroxisome	79.89	75.69
CDY31769	Canola	peroxisome	79.89	75.31
CDY45442	Canola	mitochondrion	65.08	74.32
Bra039975.1-P	Field mustard	peroxisome	74.07	72.73
CDY45439	Canola	plastid	74.34	71.14
CDY71268	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	26.98	68.46
VIT_09s0002g07160.t01	Wine grape	mitochondrion, peroxisome, plastid	66.67	68.11
Solyc01g080930.2.1	Tomato	cytosol	68.78	67.89
PGSC0003DMT400004567	Potato	extracellular	23.28	66.67
Solyc01g108800.2.1	Tomato	cytoskeleton, cytosol, peroxisome	65.34	65.17
PGSC0003DMT400066411	Potato	nucleus	24.87	64.38
PGSC0003DMT400066414	Potato	cytosol	29.1	64.33
KRH07311	Soybean	nucleus	65.08	63.57
PGSC0003DMT400066424	Potato	cytosol, nucleus, plastid	11.38	63.24
EER91893	Sorghum	cytosol	64.55	63.21
GSMUA_Achr5P13900_001	Banana	cytosol	51.85	62.82
Solyc01g094090.2.1	Tomato	cytosol	54.5	62.61
PGSC0003DMT400000054	Potato	cytosol	63.49	62.5
TraesCS1D01G194800.2	Wheat	cytosol	62.96	62.47
TraesCS1B01G206000.1	Wheat	cytosol	62.7	62.2
PGSC0003DMT400066409	Potato	cytosol	22.75	61.87
PGSC0003DMT400000043	Potato	cytosol, mitochondrion, peroxisome	43.39	61.65
PGSC0003DMT400066419	Potato	cytosol	38.62	60.83
Zm00001d007726_P001	Maize	peroxisome	39.42	60.82
GSMUA_Achr5P13870_001	Banana	cytosol	63.23	60.51
TraesCS1A01G190800.1	Wheat	plastid	62.43	60.2
Zm00001d021132_P004	Maize	extracellular	63.49	59.41
Zm00001d007746_P002	Maize	peroxisome	29.63	58.95
GSMUA_Achr8P14800_001	Banana	cytosol	60.85	57.93
Zm00001d023779_P001	Maize	extracellular	58.99	57.77
PGSC0003DMT400004521	Potato	cytosol	35.19	56.84
KXG29172	Sorghum	peroxisome	57.94	56.59
OQU84058	Sorghum	mitochondrion	60.58	55.85
HORVU1Hr1G049960.6	Barley	mitochondrion	62.17	55.69
PGSC0003DMT400004585	Potato	extracellular	38.89	55.06
Zm00001d007740_P001	Maize	peroxisome	50.79	50.93
Zm00001d007728_P001	Maize	cytosol	18.52	49.3
VIT_15s0045g01190.t01	Wine grape	cytosol, nucleus, peroxisome	50.53	48.85
Zm00001d007732_P002	Maize	extracellular	36.77	48.77
Os12t0264500-02	Rice	endoplasmic reticulum	61.9	45.61
AT3G60510.3	Thale cress	mitochondrion	46.56	41.31
GSMUA_Achr5P13890_001	Banana	nucleus	17.46	41.25
AT1G06550.1	Thale cress	cytosol	39.95	39.02
AT4G31810.1	Thale cress	mitochondrion	41.53	38.39
Solyc01g108790.1.1	Tomato	nucleus	16.93	36.36
AT4G13360.1	Thale cress	mitochondrion	35.45	31.83
AT3G24360.1	Thale cress	plastid	34.13	30.86

Protein Annotations

Gene3D:3.90.226.40	MapMan:4.2.7.4	MapMan:4.2.7.6.1	EntrezGene:817616	ProteinID:AAC02737.1	ProteinID:AEC08424.1
EMBL:AK229794	ProteinID:ANM62447.1	ArrayExpress:AT2G30660	EnsemblPlantsGene:AT2G30660	RefSeq:AT2G30660	TAIR:AT2G30660
RefSeq:AT2G30660-TAIR-G	EnsemblPlants:AT2G30660.1	TAIR:AT2G30660.1	Unigene:At.50112	EMBL:BT011751	InterPro:ClpP/crotonase-like_dom_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0003860	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005777	GO:GO:0006508	GO:GO:0006574	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0009056	GO:GO:0009083	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
InterPro:HIBYL-CoA-H	RefSeq:NP_001324604.1	RefSeq:NP_180624.2	PFAM:PF16113	PO:PO:0000037	PO:PO:0001081
PO:PO:0007064	PO:PO:0007611	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009031
PO:PO:0009047	PO:PO:0020137	PANTHER:PTHR43176	PANTHER:PTHR43176:SF6	UniProt:Q6NMB0	SUPFAM:SSF52096
UniParc:UPI00002537EB	SEG:seg	:	:	:	:

Description

Probable 3-hydroxyisobutyryl-CoA hydrolase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q6NMB0]

Coordinates

chr2:-:13058250..13061675

Molecular Weight (calculated)

42569.5 Da

IEP (calculated)

8.386

GRAVY (calculated)

-0.219

Length

378 amino acids

Sequence
(BLAST)

001: MASQSQVLVE EKSSVRILTL NRPKQLNALC FNMISRLLQL FRAYEEDPSV KLVILKGQGR AFCAGGDVPP VVQNMVQGKW RLGADFFRDQ YTLNYVMATY
101: SKPQVSILNG IVMGAGAGVS IHGRFRIATE NTVFAMPETS LGLFPDVGAS YFLSRLPGFF GEYVGLTGAR LDGAELLACG LATHFVPSTR LTALETDLCK
201: VGSSDPSFVS TILDAYTQHP HLKQKSAYHR LDVIDRCFSK RTMEEIISAL ERETTQELDD WSLTTIRALK KSSPSSLKIS LRSIREGRLQ GVGHCLTREY
301: RMVCHVMKGD LSKDLVEGCR AILIDKDRNP KWEPRRLEDM KDSMVDQFFE RVEEEERWED LKLSPRNNLH ALRIAAKL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.