Factsheet for AT3G60510.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67831	Canola	mitochondrion	82.63	87.56
CDX98420	Canola	mitochondrion	82.63	87.56
Bra003417.1-P	Field mustard	mitochondrion	80.52	85.75
CDY72221	Canola	mitochondrion	41.78	85.58
AT4G31810.1	Thale cress	mitochondrion	50.23	52.32
AT2G30660.1	Thale cress	peroxisome	41.31	46.56
AT5G65940.1	Thale cress	peroxisome	41.31	46.56
AT2G30650.1	Thale cress	peroxisome	40.61	45.77
AT1G06550.1	Thale cress	cytosol	33.1	36.43
AT4G13360.1	Thale cress	mitochondrion	29.11	29.45
AT3G24360.1	Thale cress	plastid	28.17	28.71

Protein Annotations

Gene3D:3.90.226.40	MapMan:50.3.1	EntrezGene:825222	ProteinID:AEE80073.1	ArrayExpress:AT3G60510	EnsemblPlantsGene:AT3G60510
RefSeq:AT3G60510	TAIR:AT3G60510	RefSeq:AT3G60510-TAIR-G	EnsemblPlants:AT3G60510.3	TAIR:AT3G60510.3	Unigene:At.34434
InterPro:ClpP/crotonase-like_dom_sf	UniProt:F4JBV0	GO:GO:0003674	GO:GO:0003824	GO:GO:0003860	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0016787	GO:GO:0019538	InterPro:HIBYL-CoA-H
RefSeq:NP_001190144.1	PFAM:PF16113	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR43176	PANTHER:PTHR43176:SF4	SUPFAM:SSF52096	UniParc:UPI000019707B

Description

ATP-dependent caseinolytic (Clp) protease/crotonase family protein [Source:UniProtKB/TrEMBL;Acc:F4JBV0]

Coordinates

chr3:-:22356964..22360118

Molecular Weight (calculated)

47433.3 Da

IEP (calculated)

6.833

GRAVY (calculated)

-0.161

Length

426 amino acids

Sequence
(BLAST)

001: MHNAKGLLGR IVRDKLWRFG YRRSLCSLKL TSEDLDYQVL VEGSGCSRTA ILNRPPALNA LTTHMGYRLQ KLYKNWEEDP NIGFVMMKGS GRAFCAGGDI
101: VSLYHLRTRG SPDAIREFFS SLYSFIYLLG TYLKPHVAIL NGVTMGGGTG VSIPGTFRVA TDRTIFATPE TIIGFHPDAG ASFNLSHLPG RLGEYLGLTG
201: LKLSGAEMLA CGLATHYIRS EEVPVMEEQL KKLLTDDPSV VESCLEKCAE VAHPEKTGVI RRIDLLEKCF SHDTVEEIID SLVSFFTNDS ASMTISVTRS
301: NSVLGHQEIE ASRRKDTWCI TTLRRLKESS PLSLKVALRS IREGRLQTLD QCLIREYRMS LQGLIGPMSG NFCEGVRARL IDKDEAPKWD PPSLEKVSED
401: MVDDYFCALT PTEPDLDLPV KLRESI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.