Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86518 | Canola | cytosol | 87.86 | 88.77 |
| Bra030657.1-P | Field mustard | cytosol | 86.05 | 88.56 |
| CDY15584 | Canola | cytosol | 84.75 | 86.54 |
| CDY15581 | Canola | cytosol | 55.04 | 78.02 |
| CDY15583 | Canola | cytosol | 72.09 | 75.61 |
| Bra030656.1-P | Field mustard | cytosol | 70.28 | 75.35 |
| CDX86519 | Canola | extracellular | 37.73 | 73.74 |
| CDY49269 | Canola | extracellular, mitochondrion, nucleus, plastid | 42.64 | 73.33 |
| VIT_12s0028g00590.t01 | Wine grape | cytosol | 71.32 | 70.95 |
| Solyc12g011160.1.1 | Tomato | cytosol | 69.51 | 70.05 |
| PGSC0003DMT400020300 | Potato | cytosol | 68.73 | 69.27 |
| KRH46020 | Soybean | vacuole | 70.03 | 68.09 |
| KRG98957 | Soybean | nucleus | 70.03 | 67.58 |
| EES03617 | Sorghum | cytosol | 65.37 | 66.06 |
| Zm00001d043490_P001 | Maize | cytosol, extracellular | 65.12 | 65.62 |
| TraesCS3B01G325800.1 | Wheat | cytosol | 64.6 | 64.94 |
| TraesCS3D01G290900.1 | Wheat | cytosol | 55.56 | 64.56 |
| TraesCS3A01G291100.1 | Wheat | cytosol | 63.82 | 64.16 |
| Os01t0752200-01 | Rice | plasma membrane | 64.34 | 64.01 |
| PGSC0003DMT400069137 | Potato | cytosol, mitochondrion | 46.51 | 63.6 |
| HORVU3Hr1G072100.2 | Barley | cytosol | 63.05 | 62.56 |
| PGSC0003DMT400079108 | Potato | cytosol | 55.56 | 62.5 |
| Solyc07g043690.1.1 | Tomato | cytosol | 31.01 | 62.18 |
| Solyc06g054520.1.1 | Tomato | cytosol | 64.6 | 60.68 |
| Solyc07g044710.1.1 | Tomato | plastid | 58.66 | 57.61 |
| PGSC0003DMT400041136 | Potato | cytosol | 51.16 | 57.06 |
| Solyc07g043680.2.1 | Tomato | cytosol | 58.14 | 56.53 |
| Solyc07g044720.1.1 | Tomato | plastid | 59.95 | 55.11 |
| Bra030655.1-P | Field mustard | extracellular | 25.32 | 54.75 |
| PGSC0003DMT400057075 | Potato | cytosol, plastid | 56.33 | 54.5 |
| Solyc07g044740.1.1 | Tomato | cytosol | 18.09 | 53.85 |
| GSMUA_Achr9P06670_001 | Banana | plastid | 64.86 | 53.18 |
| Solyc07g044730.2.1 | Tomato | endoplasmic reticulum, vacuole | 58.4 | 52.93 |
| PGSC0003DMT400065713 | Potato | cytosol, mitochondrion | 32.56 | 52.5 |
| PGSC0003DMT400054311 | Potato | cytosol | 21.19 | 51.57 |
| AT2G30650.1 | Thale cress | peroxisome | 40.57 | 41.53 |
| AT5G65940.1 | Thale cress | peroxisome | 39.53 | 40.48 |
| AT2G30660.1 | Thale cress | peroxisome | 39.02 | 39.95 |
| AT4G31810.1 | Thale cress | mitochondrion | 36.43 | 34.47 |
| AT3G60510.3 | Thale cress | mitochondrion | 36.43 | 33.1 |
| AT4G13360.1 | Thale cress | mitochondrion | 31.78 | 29.22 |
| AT3G24360.1 | Thale cress | plastid | 31.01 | 28.71 |
Protein Annotations
| Gene3D:3.90.226.40 | MapMan:50.3.1 | EntrezGene:837166 | ProteinID:AAF24814.1 | ProteinID:AEE28004.1 | EMBL:AK221578 |
| ArrayExpress:AT1G06550 | EnsemblPlantsGene:AT1G06550 | RefSeq:AT1G06550 | TAIR:AT1G06550 | RefSeq:AT1G06550-TAIR-G | EnsemblPlants:AT1G06550.1 |
| TAIR:AT1G06550.1 | Unigene:At.16422 | EMBL:BT022051 | EMBL:BT026035 | InterPro:ClpP/crotonase-like_dom_sf | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003860 | GO:GO:0008150 | GO:GO:0009628 | GO:GO:0016787 | GO:GO:0080167 |
| InterPro:HIBYL-CoA-H | RefSeq:NP_172142.2 | PFAM:PF16113 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000263 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR43176 | PANTHER:PTHR43176:SF2 |
| UniProt:Q9SHJ8 | SUPFAM:SSF52096 | UniParc:UPI0000196B3E | : | : | : |
Description
3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
Coordinates
chr1:-:2003627..2007212
Molecular Weight (calculated)
43259.7 Da
IEP (calculated)
5.235
GRAVY (calculated)
-0.310
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.