Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15581 | Canola | cytosol | 83.84 | 60.81 |
| Bra030655.1-P | Field mustard | extracellular | 41.41 | 45.81 |
| Solyc07g044740.1.1 | Tomato | cytosol | 25.76 | 39.23 |
| AT1G06550.1 | Thale cress | cytosol | 73.74 | 37.73 |
| PGSC0003DMT400065713 | Potato | cytosol, mitochondrion | 44.95 | 37.08 |
| CDX86518 | Canola | cytosol | 71.72 | 37.08 |
| CDY15584 | Canola | cytosol | 69.7 | 36.41 |
| CDY15583 | Canola | cytosol | 67.17 | 36.04 |
| PGSC0003DMT400069137 | Potato | cytosol, mitochondrion | 47.98 | 33.57 |
| Solyc07g043690.1.1 | Tomato | cytosol | 32.32 | 33.16 |
| CDY49269 | Canola | extracellular, mitochondrion, nucleus, plastid | 34.85 | 30.67 |
| TraesCS3D01G290900.1 | Wheat | cytosol | 50.0 | 29.73 |
| KRH46020 | Soybean | vacuole | 59.09 | 29.4 |
| KRG98957 | Soybean | nucleus | 58.08 | 28.68 |
| VIT_12s0028g00590.t01 | Wine grape | cytosol | 55.05 | 28.02 |
| PGSC0003DMT400041136 | Potato | cytosol | 48.48 | 27.67 |
| Solyc12g011160.1.1 | Tomato | cytosol | 53.54 | 27.6 |
| PGSC0003DMT400020300 | Potato | cytosol | 53.03 | 27.34 |
| PGSC0003DMT400079108 | Potato | cytosol | 47.47 | 27.33 |
| PGSC0003DMT400054311 | Potato | cytosol | 21.21 | 26.42 |
| EES03617 | Sorghum | cytosol | 51.01 | 26.37 |
| Zm00001d043490_P001 | Maize | cytosol, extracellular | 51.01 | 26.3 |
| TraesCS3B01G325800.1 | Wheat | cytosol | 51.01 | 26.23 |
| TraesCS3A01G291100.1 | Wheat | cytosol | 50.51 | 25.97 |
| Os01t0752200-01 | Rice | plasma membrane | 51.01 | 25.96 |
| HORVU3Hr1G072100.2 | Barley | cytosol | 51.01 | 25.9 |
| Solyc07g044710.1.1 | Tomato | plastid | 51.01 | 25.63 |
| PGSC0003DMT400057075 | Potato | cytosol, plastid | 51.52 | 25.5 |
| Solyc07g043680.2.1 | Tomato | cytosol | 50.51 | 25.13 |
| Solyc07g044720.1.1 | Tomato | plastid | 51.52 | 24.23 |
| Solyc07g044730.2.1 | Tomato | endoplasmic reticulum, vacuole | 50.0 | 23.18 |
| Solyc06g054520.1.1 | Tomato | cytosol | 46.97 | 22.57 |
| GSMUA_Achr9P06670_001 | Banana | plastid | 51.01 | 21.4 |
| CDY45442 | Canola | mitochondrion | 31.31 | 18.73 |
| CDY57769 | Canola | peroxisome | 31.82 | 16.89 |
| CDY55104 | Canola | cytosol | 31.82 | 16.76 |
| CDX67831 | Canola | mitochondrion | 33.84 | 16.67 |
| CDY23311 | Canola | mitochondrion | 34.34 | 16.59 |
| CDY31775 | Canola | peroxisome | 31.82 | 16.45 |
| CDX98420 | Canola | mitochondrion | 33.33 | 16.42 |
| CDY39880 | Canola | mitochondrion | 33.84 | 16.34 |
| CDX97894 | Canola | peroxisome | 31.82 | 16.24 |
| CDY62818 | Canola | peroxisome | 31.82 | 15.71 |
| CDY64934 | Canola | cytosol | 29.8 | 15.49 |
| CDY31769 | Canola | peroxisome | 30.81 | 15.21 |
| CDY45439 | Canola | plastid | 30.3 | 15.19 |
| CDX93011 | Canola | plastid | 30.3 | 14.18 |
| CDX94817 | Canola | mitochondrion, plastid | 29.8 | 13.95 |
| CDY01126 | Canola | mitochondrion, plastid | 29.29 | 13.74 |
| CDY71268 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 10.1 | 13.42 |
| CDY72221 | Canola | mitochondrion | 13.64 | 12.98 |
Protein Annotations
| EnsemblPlants:CDX86519 | EnsemblPlantsGene:GSBRNA2T00145126001 | Gene3D:3.90.226.10 | GO:A0A078DDY0 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003860 | GO:GO:0016787 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:HIBYL-CoA-H | PANTHER:PTHR43176 | PANTHER:PTHR43176:SF2 |
| PFAM:PF16113 | ProteinID:CDX86519 | ProteinID:CDX86519.1 | SEG:seg | SUPFAM:SSF52096 | UniParc:UPI0004EEC0FE |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC08g01840D
Coordinates
chrLK031846:+:388609..390411
Molecular Weight (calculated)
21911.3 Da
IEP (calculated)
5.118
GRAVY (calculated)
-0.094
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLGGGGAPL MLPAKFSVVT EYTDFATPEA NFGFHIECGF SYIHSRLPGH LGEFLALTGA ILNGKEIVAI GMATHFVPRA WNALSLSSLL DFRKCGILLT
101: DVVRSTIEEF SEKVDLDKDS ILNKYAKLGI KHWGVRALTI AKDNCPRWNP ATLDEVDDEK IKLVFKPLED DLELRIPETE ENRWEGKAET SGFASVRG
101: DVVRSTIEEF SEKVDLDKDS ILNKYAKLGI KHWGVRALTI AKDNCPRWNP ATLDEVDDEK IKLVFKPLED DLELRIPETE ENRWEGKAET SGFASVRG
001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
Arabidopsis Description
3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.