Factsheet for PGSC0003DMT400065713

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
peroxisome 1
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400069137	Potato	cytosol, mitochondrion	57.92	49.12
Solyc07g044710.1.1	Tomato	plastid	80.0	48.73
Solyc07g044730.2.1	Tomato	endoplasmic reticulum, vacuole	86.67	48.71
Solyc07g044720.1.1	Tomato	plastid	85.42	48.69
Solyc07g044740.1.1	Tomato	cytosol	25.83	47.69
PGSC0003DMT400041136	Potato	cytosol	67.92	46.97
CDX86519	Canola	extracellular	37.08	44.95
PGSC0003DMT400057075	Potato	cytosol, plastid	68.33	41.0
PGSC0003DMT400079108	Potato	cytosol	56.25	39.24
CDY49269	Canola	extracellular, mitochondrion, nucleus, plastid	34.17	36.44
PGSC0003DMT400020300	Potato	cytosol	55.83	34.9
VIT_12s0028g00590.t01	Wine grape	cytosol	54.58	33.68
KRH46020	Soybean	vacuole	55.0	33.17
AT1G06550.1	Thale cress	cytosol	52.5	32.56
KRG98957	Soybean	nucleus	54.17	32.42
PGSC0003DMT400066409	Potato	cytosol	18.75	32.37
Bra030657.1-P	Field mustard	cytosol	50.0	31.91
CDX86518	Canola	cytosol	50.42	31.59
CDY15584	Canola	cytosol	49.58	31.4
CDY15581	Canola	cytosol	35.42	31.14
PGSC0003DMT400004567	Potato	extracellular	17.08	31.06
Zm00001d043490_P001	Maize	cytosol, extracellular	47.5	29.69
PGSC0003DMT400054311	Potato	cytosol	19.58	29.56
EES03617	Sorghum	cytosol	46.67	29.24
Bra030656.1-P	Field mustard	cytosol	43.33	28.81
TraesCS3B01G325800.1	Wheat	cytosol	45.83	28.57
TraesCS3A01G291100.1	Wheat	cytosol	45.42	28.31
CDY15583	Canola	cytosol	43.33	28.18
PGSC0003DMT400066424	Potato	cytosol, nucleus, plastid	7.92	27.94
PGSC0003DMT400066419	Potato	cytosol	27.92	27.92
Os01t0752200-01	Rice	plasma membrane	45.0	27.76
HORVU3Hr1G072100.2	Barley	cytosol	45.0	27.69
Bra030655.1-P	Field mustard	extracellular	20.42	27.37
TraesCS3D01G290900.1	Wheat	cytosol	35.83	25.83
GSMUA_Achr9P06670_001	Banana	plastid	49.58	25.21
PGSC0003DMT400000054	Potato	cytosol	35.42	22.14
PGSC0003DMT400000043	Potato	cytosol, mitochondrion, peroxisome	20.83	18.8
PGSC0003DMT400004585	Potato	extracellular	18.75	16.85
PGSC0003DMT400066411	Potato	nucleus	9.58	15.75
PGSC0003DMT400004521	Potato	cytosol	15.0	15.38
PGSC0003DMT400066414	Potato	cytosol	10.83	15.2
PGSC0003DMT400043000	Potato	cytosol	10.0	12.31

Protein Annotations

EnsemblPlants:PGSC0003DMT400065713	EnsemblPlantsGene:PGSC0003DMG400025570	Gene3D:3.30.300.220	Gene3D:3.90.226.10	Gene3D:3.90.226.40	GO:GO:0003674
GO:GO:0003824	GO:GO:0003860	GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176
PANTHER:PTHR43176:SF2	PFAM:PF16113	PGSC:PGSC0003DMG400025570	SEG:seg	SUPFAM:SSF52096	UniParc:UPI00029490D2
UniProt:M1CEG8	MapMan:50.3.1	:	:	:	:

Description

Enoyl-CoA hydratase, mitochondrial [Source:PGSC_GENE;Acc:PGSC0003DMG400025570]

Coordinates

chr7:+:42397591..42400887

Molecular Weight (calculated)

27002.3 Da

IEP (calculated)

6.971

GRAVY (calculated)

-0.480

Length

240 amino acids

Sequence
(BLAST)

001: MFPMPQQVLR QNREVVMAEE IGRARMLTLN RPNHLNYLSG KVASTLGHNF EKYENDDNAD FVIIKKPHIA LVHGMSVGGG ASLMAPMKFS VVTEKAFSST
101: PETNIGFHPD CGFSYMLPRL PGRLGEYLGL TGEKLKGKEV VAAGLATHFV PSQGIRAQII DKDKSPKWNP STLDKVHDDQ LDLIFKPFED HDLELQIPIK
201: EEEEESRWRG KYENSSYSSP NQVNIQKAFR SMSSRESVLV

Best Arabidopsis Sequence Match ( AT1G06550.1 )
(BLAST)

001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG

Arabidopsis Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.