Factsheet for Os01t0752200-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 2
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytoskeleton, cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	peroxisome
PProwler:	secretory
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03617	Sorghum	cytosol	88.69	90.08
Zm00001d043490_P001	Maize	cytosol, extracellular	88.43	89.58
TraesCS3A01G291100.1	Wheat	cytosol	85.86	86.75
TraesCS3B01G325800.1	Wheat	cytosol	85.6	86.49
TraesCS3D01G290900.1	Wheat	cytosol	73.78	86.19
HORVU3Hr1G072100.2	Barley	cytosol	86.12	85.9
Solyc12g011160.1.1	Tomato	cytosol	67.1	67.97
PGSC0003DMT400020300	Potato	cytosol	66.58	67.45
Bra030657.1-P	Field mustard	cytosol	65.04	67.29
CDX86518	Canola	cytosol	65.04	66.06
CDY15584	Canola	cytosol	64.01	65.7
VIT_12s0028g00590.t01	Wine grape	cytosol	64.52	64.52
AT1G06550.1	Thale cress	cytosol	64.01	64.34
CDY49269	Canola	extracellular, mitochondrion, nucleus, plastid	36.76	63.56
KRG98957	Soybean	nucleus	63.5	61.6
KRH46020	Soybean	vacuole	62.98	61.56
GSMUA_Achr9P06670_001	Banana	plastid	70.69	58.26
PGSC0003DMT400079108	Potato	cytosol	50.39	56.98
Bra030656.1-P	Field mustard	cytosol	52.7	56.79
PGSC0003DMT400069137	Potato	cytosol, mitochondrion	41.13	56.54
CDY15583	Canola	cytosol	53.47	56.37
Solyc07g043690.1.1	Tomato	cytosol	27.76	55.96
Solyc06g054520.1.1	Tomato	cytosol	58.87	55.58
CDY15581	Canola	cytosol	38.82	55.31
PGSC0003DMT400041136	Potato	cytosol	48.84	54.76
PGSC0003DMT400054311	Potato	cytosol	21.85	53.46
Solyc07g044710.1.1	Tomato	plastid	53.98	53.3
Solyc07g043680.2.1	Tomato	cytosol	54.24	53.02
PGSC0003DMT400057075	Potato	cytosol, plastid	53.47	52.0
CDX86519	Canola	extracellular	25.96	51.01
Solyc07g044720.1.1	Tomato	plastid	53.98	49.88
Solyc07g044730.2.1	Tomato	endoplasmic reticulum, vacuole	54.5	49.65
PGSC0003DMT400065713	Potato	cytosol, mitochondrion	27.76	45.0
Solyc07g044740.1.1	Tomato	cytosol	14.91	44.62
Os10t0552900-01	Rice	mitochondrion	39.33	37.23
Bra030655.1-P	Field mustard	extracellular	16.97	36.87
Os12t0264500-02	Rice	endoplasmic reticulum	39.33	29.82
Os06t0594100-01	Rice	mitochondrion	30.33	27.19

Protein Annotations

Gene3D:3.90.226.40	EntrezGene:4324637	MapMan:50.3.1	EMBL:AK069590	ProteinID:BAD87104.1	ProteinID:BAD87179.1
ProteinID:BAF06177.1	ProteinID:BAS74371.1	InterPro:ClpP/crotonase-like_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0003860
GO:GO:0008150	GO:GO:0009628	GO:GO:0016787	GO:GO:0080167	InterPro:HIBYL-CoA-H	EnsemblPlantsGene:Os01g0752200
EnsemblPlants:Os01t0752200-01	PFAM:PF16113	PANTHER:PTHR43176	PANTHER:PTHR43176:SF2	UniProt:Q5JMX9	SUPFAM:SSF52096
UniParc:UPI00004C2892	RefSeq:XP_015621798.1	SEG:seg	:	:	:

Description

Crotonase, core domain containing protein. (Os01t0752200-01)

Coordinates

chr1:-:31552902..31556837

Molecular Weight (calculated)

43298.5 Da

IEP (calculated)

4.891

GRAVY (calculated)

-0.316

Length

389 amino acids

Sequence
(BLAST)

001: MAEPEQQQQQ ANPDEVVLGQ ETGGARVAIL NRPRQLNVIS DRVVYLLAQF LESWEKDEDA KLVIFKGAGR AFSAGGDLKM FYEGKSDDSC LEVVYRMYWL
101: CYHIHTYKKT AVALVNGLVM GGGAAMVAPL KFAVVTEKTV FATPEASVGL HTDCSFSYIH SRLPGYLGEY LALTGARLNA KEMIAAGLAT HFVPSEKLEE
201: LEKCLLNLNT GDESAVRAAI EEFSTDVQPD EDSILNKLPT INKCFSAETI EDIIKAFESE GSIDGNQWIA TVLKGMRRSS PTSLKMTLRS IREGRKQSLP
301: ECLKKEFRLT MNTLRSVVTG DVYEGIRALS IDKDNAPKWS PATLEEVKNE DIDRLFEPFS SEKELQVPSD DSNRWSGKFE HTVYGRTSE

Best Arabidopsis Sequence Match ( AT1G06550.1 )
(BLAST)

001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG

Arabidopsis Description

3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.