Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400069137 | Potato | cytosol, mitochondrion | 62.76 | 94.7 |
| Solyc07g044710.1.1 | Tomato | plastid | 81.5 | 88.32 |
| PGSC0003DMT400065713 | Potato | cytosol, mitochondrion | 48.71 | 86.67 |
| Solyc07g044720.1.1 | Tomato | plastid | 82.9 | 84.09 |
| Solyc07g044740.1.1 | Tomato | cytosol | 25.29 | 83.08 |
| Solyc07g043690.1.1 | Tomato | cytosol | 34.19 | 75.65 |
| Solyc07g043680.2.1 | Tomato | cytosol | 68.85 | 73.87 |
| Solyc12g011160.1.1 | Tomato | cytosol | 58.78 | 65.36 |
| Solyc06g054520.1.1 | Tomato | cytosol | 61.12 | 63.35 |
| KRH46020 | Soybean | vacuole | 58.08 | 62.31 |
| VIT_12s0028g00590.t01 | Wine grape | cytosol | 56.21 | 61.7 |
| KRG98957 | Soybean | nucleus | 57.61 | 61.35 |
| Bra030657.1-P | Field mustard | cytosol | 53.63 | 60.9 |
| CDX86518 | Canola | cytosol | 53.86 | 60.05 |
| CDY15584 | Canola | cytosol | 52.69 | 59.37 |
| AT1G06550.1 | Thale cress | cytosol | 52.93 | 58.4 |
| Zm00001d043490_P001 | Maize | cytosol, extracellular | 51.99 | 57.81 |
| EES03617 | Sorghum | cytosol | 51.76 | 57.7 |
| TraesCS3D01G290900.1 | Wheat | cytosol | 43.79 | 56.16 |
| CDY15581 | Canola | cytosol | 35.83 | 56.04 |
| TraesCS3B01G325800.1 | Wheat | cytosol | 49.41 | 54.81 |
| Os01t0752200-01 | Rice | plasma membrane | 49.65 | 54.5 |
| TraesCS3A01G291100.1 | Wheat | cytosol | 48.95 | 54.29 |
| HORVU3Hr1G072100.2 | Barley | cytosol | 49.18 | 53.85 |
| Bra030656.1-P | Field mustard | cytosol | 45.2 | 53.46 |
| CDY15583 | Canola | cytosol | 46.14 | 53.39 |
| CDY49269 | Canola | extracellular, mitochondrion, nucleus, plastid | 27.87 | 52.89 |
| CDX86519 | Canola | extracellular | 23.18 | 50.0 |
| Solyc05g032690.2.1 | Tomato | cytosol, mitochondrion, nucleus | 10.3 | 49.44 |
| GSMUA_Achr9P06670_001 | Banana | plastid | 53.86 | 48.73 |
| Solyc05g032680.2.1 | Tomato | mitochondrion | 12.18 | 46.02 |
| Solyc01g094090.2.1 | Tomato | cytosol | 32.32 | 41.95 |
| Solyc01g108800.2.1 | Tomato | cytoskeleton, cytosol, peroxisome | 37.0 | 41.69 |
| Solyc01g080930.2.1 | Tomato | cytosol | 36.77 | 40.99 |
| Bra030655.1-P | Field mustard | extracellular | 15.93 | 37.99 |
| Solyc01g090700.2.1 | Tomato | mitochondrion | 35.36 | 37.38 |
| Solyc10g085630.1.1 | Tomato | mitochondrion | 35.36 | 36.83 |
| Solyc05g018410.1.1 | Tomato | plastid | 20.37 | 29.0 |
| Solyc01g108790.1.1 | Tomato | nucleus | 11.71 | 28.41 |
| Solyc07g022880.2.1 | Tomato | cytosol | 7.49 | 22.22 |
Protein Annotations
| EnsemblPlants:Solyc07g044730.2.1 | EnsemblPlantsGene:Solyc07g044730.2 | Gene3D:3.90.226.40 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003860 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:HIBYL-CoA-H |
| PANTHER:PTHR43176 | PANTHER:PTHR43176:SF2 | PFAM:PF16113 | SUPFAM:SSF52096 | TMHMM:TMhelix | UniParc:UPI000276C7E2 |
| UniProt:K4CEN1 | MapMan:50.3.1 | : | : | : | : |
Description
No Description!
Coordinates
chr7:+:57778388..57781815
Molecular Weight (calculated)
48669.5 Da
IEP (calculated)
6.998
GRAVY (calculated)
-0.318
Length
427 amino acids
Sequence
(BLAST)
(BLAST)
001: MANFNLLIRV INYLFVFSSI DMAIISIPSS TTMFPMPQQV LRQDREVVVA EEIGRARMLT MNRPNHLNYI SGKMALTLGH NFEKYEDDDN ADFVIIKGAG
101: RTFSAGGDLR IFYEERNTRD SCLEGTYRMY WLCYHIHTYK KPHIALVHGM SVGGGASLMA PMKFSVVTEK AFSSTPETNI GFHPDCGFSY MLPRLPGRLG
201: EYLGLTGEKL RGKEVVAAGL ATHFVPSQKL FQLEKHLLSI KSGDEDTIRS VINEFSSNIH IDERSVLNKL SIINECFSKD SVEEIIESFE AEGSRKGNDW
301: ILAVLKSLKK ASPTALKITL RSIREGRTQT ISECLRREFR ISMNIQRAIT SGDFYEGIRA QIIDKDKSPK WNPSTLDKVH DDQLDLIFKP FEDHELELQI
401: PINEEEYRWR GKYENSSYSH LRGSVLM
101: RTFSAGGDLR IFYEERNTRD SCLEGTYRMY WLCYHIHTYK KPHIALVHGM SVGGGASLMA PMKFSVVTEK AFSSTPETNI GFHPDCGFSY MLPRLPGRLG
201: EYLGLTGEKL RGKEVVAAGL ATHFVPSQKL FQLEKHLLSI KSGDEDTIRS VINEFSSNIH IDERSVLNKL SIINECFSKD SVEEIIESFE AEGSRKGNDW
301: ILAVLKSLKK ASPTALKITL RSIREGRTQT ISECLRREFR ISMNIQRAIT SGDFYEGIRA QIIDKDKSPK WNPSTLDKVH DDQLDLIFKP FEDHELELQI
401: PINEEEYRWR GKYENSSYSH LRGSVLM
001: MAQEGQNIDE PVVIGEEKGS VRLTTLNRPR QLNVISPEVV FKLAEYLELW EKDDQTKLIL IKGTGRAFSA GGDLKVFYHG QESKDSCLEV VYRMYWLCYH
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
101: IHTYKKTQVS LVNGISMGGG AALMVPMKFS VVTEKTVFAT PEASFGFHTD CGFSYIHSRL PGHLGEFLAL TGARLNGKEL VAIGMATHFV PSGKLMDLEA
201: RLVSLDSGDA DVVQSTIEEF SEKVNLDKDS ILNKQSVINE CFSKESVKQI IQAFEAEASK DGNEWITPVI KGLKRSSPTG LKIVLQSIRE GRKQTLSDCL
301: KKEFRLTLNI LRKTISPDMY EGIRALTIDK DNSPKWNPAT LDEVDDEKIN SVFKLFEDDD IELQIPETEE NRWGGKYETS GYASVRG
Arabidopsis Description
3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.