Factsheet for Solyc01g094090.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g005310.2.1
Solyc04g072580.1.1
Solyc05g013440.2.1
Solyc07g045160.2.1
Solyc07g055840.2.1
Solyc09g010750.1.1
Solyc10g086460.1.1
Solyc12g011000.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G65940.1	Solyc01g005310.2.1	AT1G14830.1	21798944
AT5G65940.1	Solyc05g013440.2.1	AT2G42490.1	21798944
AT5G65940.1	Solyc07g055840.2.1	AT2G42790.1	21798944
AT5G65940.1	Solyc12g011000.1.1	AT2G42790.1	21798944
AT5G65940.1	Solyc09g010750.1.1	AT3G12110.1	21798944
AT5G65940.1	Solyc10g086460.1.1	AT3G12110.1	21798944
AT5G65940.1	Solyc04g072580.1.1	AT5G56630.1	21798944
AT5G65940.1	Solyc07g045160.2.1	AT5G56630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400000054	Potato	cytosol	90.58	77.6
PGSC0003DMT400000043	Potato	cytosol, mitochondrion, peroxisome	59.57	73.68
Solyc01g108800.2.1	Tomato	cytoskeleton, cytosol, peroxisome	77.81	67.55
Solyc01g080930.2.1	Tomato	cytosol	76.29	65.54
GSMUA_Achr5P13900_001	Banana	cytosol	55.32	58.33
Solyc05g032690.2.1	Tomato	cytosol, mitochondrion, nucleus	15.2	56.18
AT5G65940.1	Thale cress	peroxisome	64.13	55.82
CDY57769	Canola	peroxisome	63.22	55.76
Bra031802.1-P	Field mustard	cytosol	63.53	55.59
CDY55104	Canola	cytosol	63.53	55.59
AT2G30660.1	Thale cress	peroxisome	62.61	54.5
VIT_09s0002g07160.t01	Wine grape	mitochondrion, peroxisome, plastid	59.88	53.24
KRH07311	Soybean	nucleus	62.61	53.23
TraesCS1D01G194800.2	Wheat	cytosol	60.18	51.97
Bra018392.1-P	Field mustard	cytosol	58.66	51.88
AT2G30650.1	Thale cress	peroxisome	59.57	51.85
TraesCS1B01G206000.1	Wheat	cytosol	59.57	51.44
Bra018395.1-P	Field mustard	cytosol	58.05	51.21
EER91893	Sorghum	cytosol	59.88	51.04
CDY31775	Canola	peroxisome	58.66	50.39
TraesCS1A01G190800.1	Wheat	plastid	59.88	50.26
GSMUA_Achr5P13870_001	Banana	cytosol	60.18	50.13
Zm00001d023779_P001	Maize	extracellular	58.66	50.0
GSMUA_Achr8P14800_001	Banana	cytosol	59.57	49.37
Bra039975.1-P	Field mustard	peroxisome	57.75	49.35
CDX97894	Canola	peroxisome	58.05	49.23
CDY62818	Canola	peroxisome	59.88	49.13
KXG29172	Sorghum	peroxisome	57.45	48.84
Zm00001d021132_P004	Maize	extracellular	59.88	48.76
Bra039968.1-P	Field mustard	peroxisome	58.36	48.12
CDY31769	Canola	peroxisome	58.36	47.88
OQU84058	Sorghum	mitochondrion	59.57	47.8
HORVU1Hr1G049960.6	Barley	mitochondrion	60.18	46.92
CDY45439	Canola	plastid	56.23	46.84
CDY45442	Canola	mitochondrion	47.11	46.83
Zm00001d007726_P001	Maize	peroxisome	34.04	45.71
Zm00001d007740_P001	Maize	peroxisome	50.76	44.3
Zm00001d007732_P002	Maize	extracellular	37.08	42.81
Zm00001d007746_P002	Maize	peroxisome	24.62	42.63
Zm00001d007728_P001	Maize	cytosol	17.63	40.85
Solyc07g043690.1.1	Tomato	cytosol	23.1	39.38
Os12t0264500-02	Rice	endoplasmic reticulum	59.57	38.21
VIT_15s0045g01190.t01	Wine grape	cytosol, nucleus, peroxisome	45.29	38.11
Solyc01g090700.2.1	Tomato	mitochondrion	46.2	37.62
CDY71268	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	17.02	37.58
Solyc12g011160.1.1	Tomato	cytosol	43.16	36.98
Solyc07g044710.1.1	Tomato	plastid	42.55	35.53
Solyc06g054520.1.1	Tomato	cytosol	44.07	35.19
Solyc10g085630.1.1	Tomato	mitochondrion	42.86	34.39
Solyc07g043680.2.1	Tomato	cytosol	41.03	33.92
Solyc07g022880.2.1	Tomato	cytosol	14.59	33.33
Solyc07g044720.1.1	Tomato	plastid	42.25	33.02
Solyc07g044730.2.1	Tomato	endoplasmic reticulum, vacuole	41.95	32.32
Solyc05g032680.2.1	Tomato	mitochondrion	9.73	28.32
Solyc05g018410.1.1	Tomato	plastid	25.53	28.0
GSMUA_Achr5P13890_001	Banana	nucleus	10.94	22.5
Solyc01g108790.1.1	Tomato	nucleus	11.55	21.59
Solyc07g044740.1.1	Tomato	cytosol	7.6	19.23

Protein Annotations

EnsemblPlants:Solyc01g094090.2.1	EnsemblPlantsGene:Solyc01g094090.2	Gene3D:3.90.226.40	GO:GO:0003674	GO:GO:0003824	GO:GO:0003860
GO:GO:0016787	InterPro:ClpP/crotonase-like_dom_sf	InterPro:HIBYL-CoA-H	PANTHER:PTHR43176	PANTHER:PTHR43176:SF6	PFAM:PF16113
SEG:seg	SUPFAM:SSF52096	UniParc:UPI00027687A2	UniProt:K4AZF0	MapMan:4.2.7.4	:

Description

No Description!

Coordinates

chr1:+:85672701..85678288

Molecular Weight (calculated)

36559.3 Da

IEP (calculated)

8.367

GRAVY (calculated)

-0.017

Length

329 amino acids

Sequence
(BLAST)

001: MAQTSCNNGE TDQVLVEERG SVRTFILNRP KQLNALSFQM ISRLAELFYA SEEDSNVKMI ILKGHGRAFC AGGDLSTPFH IIHQGNWQLG ANYIRELYTL
101: IYMIATYRKP QVSILNGIVM GAGAGVSIHG RFRVATEKSV FAMPETAMGL FPDVGSSYFL SRLPGFFGEY AGLTGFRLDG AEMFACGLAT HFVSSDKLPL
201: LEQALVEVNT SDPDAISAII SHFSHIPKLK EGSPYHKMKI INHCFSRRTI EEIISTLESK ALDKKDDWIS STIQLLKKAS PTSLKITLRL IREGRLQGVD
301: SCLVREYGIF CHVLRGESLT RIFLRDSGP

Best Arabidopsis Sequence Match ( AT5G65940.2 )
(BLAST)

001: MAVEMASQSQ VLVEEKSSVR ILTLNRPKQL NALSFHMISR LLQLFLAFEE DPSVKLVILK GHGRAFCAGG DVAAVVRDIN QGNWRLGANY FSSEYMLNYV
101: MATYSKAQVS ILNGIVMGGG AGVSVHGRFR IATENTVFAM PETALGLFPD VGASYFLSRL PGFFGEYVGL TGARLDGAEM LACGLATHFV PSTRLTALEA
201: DLCRINSNDP TFASTILDAY TQHPRLKQQS AYRRLDVIDR CFSRRTVEEI ISALEREATQ EADGWISATI QALKKGSPAS LKISLRSIRE GRLQGVGQCL
301: IREYRMVCHV MKGEISKDFV EVLQAFSI

Arabidopsis Description

CHY13-hydroxyisobutyryl-CoA hydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKJ1]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.