Skip to main content
crop-pal logo
Maize
Search for another protein from :
Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • plastid 1
  • peroxisome 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome, plastid
iPSORT:plastid
MultiLoc:peroxisome
PProwler:peroxisome
WoLF PSORT:peroxisome
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d003309_P002
Zm00001d009716_P001
Zm00001d011373_P002
Zm00001d013426_P002
Zm00001d016081_P002
Zm00001d016248_P001
Zm00001d033751_P003
Zm00001d038775_P002
Zm00001d043563_P002
Zm00001d044191_P004
Zm00001d046072_P001
Zm00001d053382_P002

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G65940.1 Zm00001d013426_P002 AT1G14830.1 21798944
AT5G65940.1 Zm00001d033751_P003 AT1G14830.1 21798944
AT5G65940.1 Zm00001d003309_P002 AT2G42490.1 21798944
AT5G65940.1 Zm00001d016248_P001 AT2G42790.1 21798944
AT5G65940.1 Zm00001d009716_P001 AT4G01090.1 21798944
AT5G65940.1 Zm00001d011373_P002 AT4G01090.1 21798944
AT5G65940.1 Zm00001d016081_P002 AT4G01090.1 21798944
AT5G65940.1 Zm00001d044191_P004 AT4G01090.1 21798944
AT5G65940.1 Zm00001d046072_P001 AT4G01090.1 21798944
AT5G65940.1 Zm00001d053382_P002 AT4G01090.1 21798944
AT5G65940.1 Zm00001d038775_P002 AT5G56630.1 21798944
AT5G65940.1 Zm00001d043563_P002 AT5G56630.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d007746_P002 Maize peroxisome 62.86 81.05
PGSC0003DMT400066411 Potato nucleus 34.29 57.53
CDY71268 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole 33.88 55.7
PGSC0003DMT400066424 Potato cytosol, nucleus, plastid 15.1 54.41
PGSC0003DMT400066414 Potato cytosol 37.55 53.8
Zm00001d007732_P002 Maize extracellular 58.78 50.53
KXG29172 Sorghum peroxisome 79.59 50.39
OQU84058 Sorghum mitochondrion 83.27 49.76
PGSC0003DMT400004521 Potato cytosol 47.35 49.57
Zm00001d021132_P004 Maize extracellular 81.63 49.51
PGSC0003DMT400004585 Potato extracellular 52.65 48.31
TraesCS1B01G206000.1 Wheat cytosol 74.29 47.77
TraesCS1D01G194800.2 Wheat cytosol 73.88 47.51
TraesCS1A01G190800.1 Wheat plastid 74.29 46.43
Zm00001d023779_P001 Maize extracellular 73.06 46.37
PGSC0003DMT400004567 Potato extracellular 24.9 46.21
Zm00001d007740_P001 Maize peroxisome 70.61 45.89
CDY45442 Canola mitochondrion 60.0 44.41
PGSC0003DMT400066409 Potato cytosol 24.9 43.88
PGSC0003DMT400000043 Potato cytosol, mitochondrion, peroxisome 46.12 42.48
HORVU1Hr1G049960.6 Barley mitochondrion 73.06 42.42
VIT_09s0002g07160.t01 Wine grape mitochondrion, peroxisome, plastid 63.27 41.89
Solyc01g080930.2.1 Tomato cytosol 63.27 40.47
CDY57769 Canola peroxisome 61.22 40.21
VIT_15s0045g01190.t01 Wine grape cytosol, nucleus, peroxisome 64.08 40.15
Solyc01g108800.2.1 Tomato cytoskeleton, cytosol, peroxisome 61.22 39.58
AT2G30660.1 Thale cress peroxisome 60.82 39.42
AT5G65940.1 Thale cress peroxisome 60.41 39.15
CDY55104 Canola cytosol 60.0 39.1
Bra031802.1-P Field mustard cytosol 60.0 39.1
AT2G30650.1 Thale cress peroxisome 59.18 38.36
KRH07311 Soybean nucleus 60.41 38.24
GSMUA_Achr8P14800_001 Banana cytosol 61.63 38.04
Bra018392.1-P Field mustard cytosol 57.14 37.63
GSMUA_Achr5P13870_001 Banana cytosol 60.0 37.22
Bra039968.1-P Field mustard peroxisome 60.0 36.84
CDY31775 Canola peroxisome 57.55 36.81
CDY45439 Canola plastid 59.18 36.71
CDY31769 Canola peroxisome 59.59 36.41
Os12t0264500-02 Rice endoplasmic reticulum 75.51 36.06
CDX97894 Canola peroxisome 56.73 35.82
PGSC0003DMT400000054 Potato cytosol 55.92 35.68
CDY62818 Canola peroxisome 58.37 35.66
Bra018395.1-P Field mustard cytosol 54.29 35.66
GSMUA_Achr5P13900_001 Banana cytosol 43.67 34.29
Solyc01g094090.2.1 Tomato cytosol 45.71 34.04
Bra039975.1-P Field mustard peroxisome 52.65 33.51
GSMUA_Achr5P13890_001 Banana nucleus 21.63 33.12
Solyc01g108790.1.1 Tomato nucleus 22.04 30.68
Zm00001d043490_P001 Maize cytosol, extracellular 42.04 26.82
Zm00001d029860_P001 Maize plasma membrane 44.08 26.6
PGSC0003DMT400066419 Potato cytosol 23.67 24.17
Zm00001d046456_P009 Maize plastid 30.61 16.78
VIT_15s0045g01170.t01 Wine grape cytosol 2.86 4.79
Zm00001d007728_P001 Maize cytosol 0.82 1.41
Protein Annotations
EnsemblPlants:Zm00001d007726_P001EnsemblPlants:Zm00001d007726_T001EnsemblPlantsGene:Zm00001d007726Gene3D:3.90.226.40GO:GO:0003674GO:GO:0003824
GO:GO:0003860GO:GO:0016787InterPro:ClpP/crotonase-like_dom_sfInterPro:HIBYL-CoA-HPANTHER:PTHR43176PANTHER:PTHR43176:SF6
PFAM:PF16113ProteinID:ONM27478.1SEG:segSUPFAM:SSF52096UniParc:UPI0008450FB5UniProt:A0A1D6F8H1
MapMan:4.2.7.4:::::
Description
3-hydroxyisobutyryl-CoA hydrolase 1
Coordinates
chr2:-:238231837..238234924
Molecular Weight (calculated)
28018.8 Da
IEP (calculated)
6.663
GRAVY (calculated)
-0.282
Length
245 amino acids
Sequence
(BLAST)
001: MVFAMPETFL GHFPDVGASY FLSRLPGFYG EYVALTGARL DGAEMLACGL ATHFVPSNRM LLLEESLKKV NTSNSFVVCS TIDQFSQQPS LKQKSSLNRL
101: EIINKCFSKR TVEEIISSLE QVASNMADEW AAETIRYLKR ASPTSLKITM RSMREGRTQT IGECLQREYR MVCHVIRGDF SRDLFEGCRA ILVDKDKNPK
201: WMPTRLEQVH DEAVEEYFSR IDDPRWEDLN LPVICSHGRI MDSKL
Best Arabidopsis Sequence Match ( AT2G30650.1 )
(BLAST)
001: MASHSQVLVE EKSSVRILTF NRPKQLNALS FHMVSRLLQL FLAYEEDPSV KLVVLKGQGR AFSAGGDIPP IVRDILQGKL IRGAHYFKVG YTLNYVLSTY
101: RKPQVSILNG IVMGGGAGLS TNGRFRIATE NTVFAMPETA LGLFPDVGAS YFLSRLPGFF GEYVGLTGAR LDGAEMLACG LATHFVPSIS LTALEAELYK
201: VGSSNQTFIS TILDAYAEYP HLNQHSSYHR LDVIDRCFSK RTVEEIFSAL EREVTQKPND WLLATIQALE KASPSCLKIS LRSIREGRLQ GVGQCLIREY
301: RMVCHVMKGD ISKDFVEGCR AVLIDKDRNP KWQPRRLEDV TDSMVDQYFE RVEDEEGWED LKFPPRNNLP ALAIAAKL
Arabidopsis Description
Probable 3-hydroxyisobutyryl-CoA hydrolase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEY5]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.